Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 860 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

 Score =  194 bits (494), Expect = 1e-53
 Identities = 149/435 (34%), Positives = 221/435 (50%), Gaps = 28/435 (6%)

Query: 209 QFLAWHDPLTRLKNR----NFIVKKLKKRRRNQQEPIALILFDLNRFKELNDTMGYAFGD 264
           +FL+ HD LT L NR     F+  KL K   N   P A+I  DL++FK +ND  G++ GD
Sbjct: 434 EFLSRHDELTGLPNRYHIKEFLAGKLAKEDLNHY-PFAMICLDLDKFKPVNDIFGHSTGD 492

Query: 265 QLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCT--GNADFFIRNLWNDLTK--LVQ 320
            LL  +A  L    R   +  AR G DEF +LL   +     +   R +  +L +   ++
Sbjct: 493 ALLGEVASRLKNCVRRGDF-VARQGGDEFMLLLGNTSQQDQIEEVCRRIVQELNRPFAIE 551

Query: 321 ENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDI 380
            ND    + V+MG+         +SSS   A+ LL  AD+AL  AK++   + VYY  D+
Sbjct: 552 GNDVA--IGVSMGIALAPR----DSSS---ANDLLRYADIALYQAKQSGRNRWVYYRPDM 602

Query: 381 ESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRLGC-EALIRWQHSEFGYINP 439
                ++R L  +L+  +    +  LYL YQP  +     +   EAL+RWQH   G I P
Sbjct: 603 SEKLTERRKLELELKTAI---REEQLYLVYQPRYNLRYSTIDAVEALVRWQHPARGTIMP 659

Query: 440 QYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLFDET-LPTLVT 498
              I +AEE GL   L  W++++   A   D  P    L VS+N+S   F  + L   + 
Sbjct: 660 DQFIPLAEETGLIISLSNWVIRKA-CAETKDKLPG---LSVSVNISAIEFQASDLAERIK 715

Query: 499 TIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLNH 558
            I        N + +E+TE +T+ D  ++L  ++SL+KM VR  +DDFGTG++SL  L  
Sbjct: 716 EILRETGLEPNRLEIEVTENVTLSDPEKTLQTMKSLKKMGVRILIDDFGTGYASLSYLRK 775

Query: 559 LKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGVD 618
            +F  LK+DKSF+  +  + Q    +  I++L     M V AEG+E   QL  LK+   D
Sbjct: 776 FQFDGLKLDKSFIFTLGDSPQNQSVVEKIIDLGKAYSMAVTAEGVETAEQLSFLKKNKCD 835

Query: 619 EFQGYYFSRPITKTE 633
           E QGY   +P   T+
Sbjct: 836 EVQGYLLGKPAAITD 850