Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  186 bits (472), Expect = 3e-51
 Identities = 136/444 (30%), Positives = 220/444 (49%), Gaps = 21/444 (4%)

Query: 203 RSADYQ-QFLAWHDPLTRLKNRNFIVKKLKK---RRRNQQEPIALILFDLNRFKELNDTM 258
           +S ++Q ++ A  D LT L NR  + ++L++   R +  +  +A+   DLNRFK++NDT+
Sbjct: 246 KSQEHQIRYQASFDRLTDLPNRWLVCERLEEAIVRAQRTKSKVAVAFLDLNRFKQVNDTL 305

Query: 259 GYAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADF--FIRNLWNDLT 316
           G+  GD+LL  +A  L + C        R+G DEF ++       +     +  +   ++
Sbjct: 306 GHHAGDELLKLVARRL-RNCTRMTDTVGRLGGDEFLIVAPDAADRSAGARLVEKVLYSMS 364

Query: 317 KLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYY 376
           +    ++       ++G+        T       A  LL NADLA+  AK+ PE + V+Y
Sbjct: 365 EPFSVHNQELFCGASIGIAFYPDDGET-------ADQLLRNADLAMYHAKRNPEHKYVFY 417

Query: 377 TRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDR-LGCEALIRWQHSEFG 435
              +         L   L++           L +QP +    +R +G EALIRW+H   G
Sbjct: 418 DSGMRERSGFTLGLESDLRRA---SGGDEFELHFQPKIDLVGNRTIGAEALIRWRHPVRG 474

Query: 436 YINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRL-DVSINLSNSLF-DETL 493
            ++P   I +AEE GL  ++GAW + +    L  DW   +  +  VS+NLS   F D  L
Sbjct: 475 VVSPAEFIPLAEETGLIWEIGAWTLIESCRRLA-DWIRRDLPIPSVSVNLSPRQFQDARL 533

Query: 494 PTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSL 553
              V ++        + + LELTE   I D  +++ I+  L+ + VR ++DDFGTG+SSL
Sbjct: 534 VGFVRSVVESAGIPADRLELELTEGAMIGDIEKAVTILNGLKDIGVRLSIDDFGTGYSSL 593

Query: 554 YQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLK 613
             L       LKID+SFV ++ ++      + +IVNL+  LG   +AEG+E   Q + L+
Sbjct: 594 AYLKRFPIDTLKIDRSFVRDIVKSTTDPAIVGTIVNLAESLGFDTIAEGVETQEQADMLR 653

Query: 614 QLGVDEFQGYYFSRPITKTEFATF 637
           Q      QGY  SRP+   +F  F
Sbjct: 654 QQRCTRIQGYLISRPLPIDQFEAF 677