Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  196 bits (498), Expect = 3e-54
 Identities = 137/432 (31%), Positives = 221/432 (51%), Gaps = 18/432 (4%)

Query: 209 QFLAWHDPLTRLKNRNFIVKKLKKRRRNQQEP---IALILFDLNRFKELNDTMGYAFGDQ 265
           Q LA HDPLT L NR    +   ++ R  +E    +AL+  DL+ FK +ND +G+A GD+
Sbjct: 196 QHLAHHDPLTNLPNRILGERLFNEKLRESEEKGLQLALLFIDLDNFKPVNDALGHAAGDR 255

Query: 266 LLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNA--DFFIRNLWNDLTKLVQEND 323
            L  I++ +T    S      R G DEF VL    +  +  D   +NL   +T    E +
Sbjct: 256 FLQKISQTITDHL-STKQSLIRFGGDEFIVLAPEISDKSEIDDLCKNL---ITWCSNEFE 311

Query: 324 PTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDIESA 383
             +   V  G +      +      ++   L   AD+A+  AK+    +  YY    +  
Sbjct: 312 VLQTKVVVSGSIGVAQAPY----DGIKFKQLCRKADIAMYEAKRNGRNRYEYYDVRFDEE 367

Query: 384 YNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRL-GCEALIRWQHSEFGYINPQYL 442
            ++K  L ++L+  +   N+  +Y  YQP++    + +   EAL+RW   +   I P   
Sbjct: 368 NDEKFTLIQRLRPAV-QANEFEVY--YQPLIDLASNEVQAVEALLRWPQKDGSMIFPDKF 424

Query: 443 IEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLF-DETLPTLVTTIF 501
           I +AE  GL   LGAW++ Q         +  +  L V++NLS + F D TLP +V    
Sbjct: 425 IPLAESSGLIIPLGAWVLNQACEFCAKQHENGHTNLTVAVNLSFAQFKDGTLPAVVEQAL 484

Query: 502 GHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLNHLKF 561
            + +     + LELTET+  D+   +   +E+++ + V FA+DDFGTG+S+L  L     
Sbjct: 485 QNSQLAPQFLELELTETILADENGTTGEQLEAIKSLGVHFAIDDFGTGYSNLNYLQTFSA 544

Query: 562 SKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGVDEFQ 621
            KLKID+ F++ +   +  A  +A+I++++  LGM+ VAEGIE    LE+L ++G D  Q
Sbjct: 545 RKLKIDRIFINTLGIGENDAPLVAAIISIADSLGMKAVAEGIESKPALEKLIKMGCDLGQ 604

Query: 622 GYYFSRPITKTE 633
           GYY+S+P+   E
Sbjct: 605 GYYWSKPLPAPE 616