Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 777 a.a., Cyclic di-GMP phosphodiesterase Gmr from Alteromonas macleodii MIT1002

 Score =  205 bits (522), Expect = 6e-57
 Identities = 143/463 (30%), Positives = 238/463 (51%), Gaps = 28/463 (6%)

Query: 188 AAILLMLILLSYMTYRSADYQQFLAWHDPLTRLKNRNFIVKKLK---KRRRNQQEPIALI 244
           A+I +   L + + ++ A++       D LT L NRN ++  L+   K    + + +A+I
Sbjct: 334 ASIAIERELANQLIWKQANF-------DSLTGLPNRNLMLDHLQLAIKAADRESDKVAVI 386

Query: 245 LFDLNRFKELNDTMGYAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTG-- 302
             DL+ FK++NDT+G+  GD+LLI  A  + Q  RS     +R+G DEF ++L+   G  
Sbjct: 387 FLDLDNFKDINDTLGHDIGDKLLIECARRIKQCLRSDD-TVSRLGGDEFVIILNGIKGLS 445

Query: 303 NADFFIRNLWNDLTKLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLAL 362
           + +  ++ L  ++ K           S ++GV T    D  +         LL NAD A+
Sbjct: 446 SIELVVQKLLGEIVKPYSLELERVHTSASLGV-TLYPDDAKD------VKGLLKNADQAM 498

Query: 363 NIAKKAPEGQVVYYTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDR-L 421
             AK   +    YYT D+++A  K+  L   L+  +       L++ YQPI      + +
Sbjct: 499 YGAKDLGKNNYQYYTHDMQTAAIKRMTLLNDLRYAV---KNKELFIEYQPIACFSSQKVM 555

Query: 422 GCEALIRWQHSEFGYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRR-LDV 480
             EAL+RWQH   G I P   I +AEE GL   +  W+  +V   ++  WK  NR+ L V
Sbjct: 556 KAEALLRWQHPTKGRITPDEFIPLAEESGLIIDISNWVFNEVCANIKQ-WKAQNRQELQV 614

Query: 481 SINLSNSLFD--ETLPTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMK 538
           SIN S S +   E+  T    +    +    +I+LE+TE + ++        +    +  
Sbjct: 615 SINTSPSHYFNLESNITQWLNLLLDQKISARSILLEVTENLLMEANEMVSKKLFQFRQAG 674

Query: 539 VRFALDDFGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQV 598
           V  ALDDFGTG+SS+  L       +KID+SFV +M       +   +I+ ++++LG++V
Sbjct: 675 VDIALDDFGTGYSSISYLKRFPTDFIKIDRSFVKSMTDVSNDKVLCEAIIVMANKLGIKV 734

Query: 599 VAEGIEQLAQLEQLKQLGVDEFQGYYFSRPITKTEFATFCDHY 641
           VAEG+E   Q + LK +G D  QGY+ ++P++K++F +F + +
Sbjct: 735 VAEGVETQEQYDILKSMGCDYAQGYFIAKPLSKSDFESFWERH 777