Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  216 bits (550), Expect = 3e-60
 Identities = 147/469 (31%), Positives = 241/469 (51%), Gaps = 27/469 (5%)

Query: 189 AILLMLILLSYMTY--------RSADYQQFLAWHDPLTRLKNRNFIVKKLKKRRRN--QQ 238
           A+ L+L+ L   TY        ++    + L+ HDPLT + NR   ++ L +R R+    
Sbjct: 222 AVTLLLLALGLSTYVIDAQSTQQAVARYRHLSLHDPLTGIPNRAAFIEHLNRRTRHISMG 281

Query: 239 EPIALILFDLNRFKELNDTMGYAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLH 298
              AL+  DL+RFKE+ND  G+A GD +L  IA+  +   ++  +  AR+G DEF  + H
Sbjct: 282 AHTALLSIDLDRFKEINDVHGHAAGDAVLRAIADRASSVLKAGEF-LARMGGDEFVAMTH 340

Query: 299 PCTGNADF--FIRNLWNDLTKLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLN 356
                AD   F + L   ++K V+ N  T  +  ++G+    T         + A +L+ 
Sbjct: 341 SYYTRADGAEFAQRLIEQISKPVEWNGQTFSVGASVGISVRNT-------GSIDADTLMA 393

Query: 357 NADLALNIAKKAPEGQVVYYTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSR 416
            AD+A+  AK A    + +Y + ++ A   +  LA  ++  L + N+  LY   Q   ++
Sbjct: 394 QADVAMYRAKSATSDTICFYDKSMDEAARARNALAIAMRSGLAN-NEFELYYQQQND-TK 451

Query: 417 DPDRLGCEALIRWQHSEFGYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNR 476
               +G EAL+RW+H E G ++P   I IAE+ G   +LG W++++   A    WK   +
Sbjct: 452 SGSIVGFEALLRWKHPERGMVSPVEFIPIAEQTGFIVELGEWVLREA-CAQAARWK---K 507

Query: 477 RLDVSINLS-NSLFDETLPTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLE 535
            L +++N++   L D   P  V  I          + LE+TE   I D   +L  I  L+
Sbjct: 508 SLAIAVNVAPQQLADNDFPDKVERILAETGLAPERLELEITEGSIIADHRHALVTIRKLK 567

Query: 536 KMKVRFALDDFGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLG 595
            + V+ A+DD+GTG+SSL  L    F K+KID++F+D ++ N Q    + S + L+H L 
Sbjct: 568 SLGVKIAMDDYGTGYSSLSTLQSFPFDKIKIDRAFIDGLSTNVQSEAIVRSTLILAHSLN 627

Query: 596 MQVVAEGIEQLAQLEQLKQLGVDEFQGYYFSRPITKTEFATFCDHYFSS 644
           + V+AEG+E  A +E L++ G  + QG++F +P   T  A   D  F S
Sbjct: 628 IPVLAEGVETKAHIEFLRREGCLQVQGFFFGKPGPLTSIANLVDDTFLS 676