Pairwise Alignments

Query, 508 a.a., SELO family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Selenoprotein O and cysteine-containing homologs from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  398 bits (1023), Expect = e-115
 Identities = 228/483 (47%), Positives = 290/483 (60%), Gaps = 12/483 (2%)

Query: 31  RFAALPQAFYTPVHPQPLQNVRWGMWNSRLAQQFGLPEA--PNDELLLSLSGQQLPADFS 88
           RFA+L +AFYT   P PL +  W   +  +A   GL  A   +   L + +G    A   
Sbjct: 14  RFASLGEAFYTFRAPTPLPSPHWVGTSPAVADLLGLDRAWLASPAALDAFTGNLPIAGTQ 73

Query: 89  PVAMKYAGHQFGVYNPDLGDGRGLLLAEMATKQGEVFDIHLKGAGLTPYSRMGDGRAVLR 148
           P+A  Y+GHQFG +   LGDGR +LL E+ T  G   ++ LKGAGLTPYSRMGDGRAVLR
Sbjct: 74  PLASVYSGHQFGHWAGQLGDGRAILLGEVDTPSGPQ-EVQLKGAGLTPYSRMGDGRAVLR 132

Query: 149 SSLREYLCSEAMAGLGIATTRALALMSSETPVYREREERGALLVRLAHTHVRFGHFEHFF 208
           SS+RE+LCSEAM  LGI T+RAL +  S  PV RE  E  A++ R+A + +RFGHFEHF 
Sbjct: 133 SSIREFLCSEAMHALGIPTSRALCVTGSPAPVRREEIETAAVVTRVAPSFIRFGHFEHFS 192

Query: 209 YTDQHANLKLLADKVIEWHFPDCVQTS-KPYAAWFSQVVERTALMIAQWQAYGFNHGVMN 267
           +   H  L+ LAD VI+  +P C + +  PYAA    V  RTA M+AQWQA GF HGVMN
Sbjct: 193 HHGLHGELRQLADFVIDRFYPACREAAGNPYAALLEAVSARTAEMVAQWQAVGFCHGVMN 252

Query: 268 TDNMSILGETFDYGPFAFLDDYDPNFICNHSDYQGRYAFDQQPRIGLWNLSALAHALSPL 327
           TDNMSILG T DYGPF FLD ++P  +CNHSD  GRYA+++QP I  WNL AL  AL PL
Sbjct: 253 TDNMSILGLTIDYGPFQFLDAFNPGHVCNHSDTGGRYAYNRQPNIAYWNLFALGQALLPL 312

Query: 328 IDKDDLEA--ALGSYSERLNLHFSRLMRAKLGLATQQEGDGELFADFFALLANNHTDYTR 385
           +D D  +A  AL  Y   +     R M AKLGL+  ++GD EL      L+A +  D+T 
Sbjct: 313 MD-DQQQALDALEPYKALMPAALQRRMNAKLGLSRTEDGDAELTESLMKLMAADAVDFTI 371

Query: 386 FLRELSCLDRQGNEAVIDLVLDREAAKTWLTRYLERAARELGQEGRPISTRERCQAMRQV 445
           F R LS       + V DL L REA   W  R+ ER   E G +      R     M + 
Sbjct: 372 FWRRLSHAVAGALDPVRDLFLQREAFDAWAVRWQERLRAETGFDAAATQAR-----MLRT 426

Query: 446 NPKYILRNYLAQQAIEFAERGDFEEMQRLATVLASPYAEHPEFERYAKLPPEWGKKLEIS 505
           NP+ +LRN+L + AI+ A++GDF E+ RL   L  P+      E  A  PP+W  ++EIS
Sbjct: 427 NPQVVLRNHLGEIAIQRAKQGDFSELARLQYALEHPFEALAGQEDLAAFPPDWASQIEIS 486

Query: 506 CSS 508
           CSS
Sbjct: 487 CSS 489