Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

 Score =  111 bits (277), Expect = 3e-29
 Identities = 69/250 (27%), Positives = 122/250 (48%), Gaps = 2/250 (0%)

Query: 42  HPKGIAASLLEKRVNEEMNGKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKF 101
           HP  + A  +  ++  E  G+  + +FP+S L  D  +L  L +G ++    S       
Sbjct: 50  HPMNVRAQEMAAKIKAETKGRVEINIFPSSQLGGDTDMLSQLRSGAIEFFTLSPLILSTL 109

Query: 102 TKKYRIFDLPFLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLE-FWHNGMKQISAN-KP 159
                I  + F F D  +V +      G  ++  +++ G+  ++  W NG +QI+ + KP
Sbjct: 110 VPNASISGIGFAFPDYASVWKAMDGDLGTYVRGQISKAGIVAMDKIWDNGFRQITTSTKP 169

Query: 160 ILVPADAKGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYG 219
           I   AD KGLK RV  S +  + F+   + P  ++FAE Y  LQT+ +D QEN  + I  
Sbjct: 170 IETAADLKGLKIRVPVSPLWTSMFKAFDSAPASLNFAEVYTALQTRAVDAQENPLAIIST 229

Query: 220 QKYFEVQDGTTETNHGILDYLVVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEE 279
            K +EVQ   + TNH    +  + + + ++ LP D+R   AK +NE  +++  +   +  
Sbjct: 230 AKLYEVQKYCSLTNHMWDGFWFLANRRAFEKLPDDLRAIVAKNINEAGLKQRDDVFALNN 289

Query: 280 LNKQYIIEAG 289
             ++ + E G
Sbjct: 290 NLRKELAEKG 299