Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., 2,3-diketo-L-gulonate-binding periplasmic protein YiaO from Xanthobacter sp. DMC5

 Score =  122 bits (307), Expect = 1e-32
 Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 3/295 (1%)

Query: 10  ASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVFP 69
           A++  V+    A    P  + +KF +    D H   +        ++ E +G   + +FP
Sbjct: 18  AAVGGVSLAAPAVFAKPEPLKLKFGNDL-PDSHSVNVRLREAIAAISAETDGALDISLFP 76

Query: 70  NSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQSSAKG 129
           N+ L  D  ++  L +G ++LA    +          +  + F F   D V      A G
Sbjct: 77  NNQLGSDPDMMSQLRSGALELATMPGTVLSTILPITALTGVGFAFTSYDKVWAAMDGAVG 136

Query: 130 EELKNAMTRRGVKGLE-FWHNGMKQI-SANKPILVPADAKGLKFRVQASDVLVAQFEQIG 187
           + +++ + +  + G +  W NG +QI S+ +PI  P D  G K RV    + V+ F   G
Sbjct: 137 DLIRSNLVKANLVGFDKVWDNGFRQITSSTRPIREPGDLAGFKIRVPLVPLWVSMFSAFG 196

Query: 188 ANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTSSKW 247
           A+P  +  AE Y  LQTK+ DGQEN  + IY  K+FEVQ   + TNH    + ++ S K 
Sbjct: 197 ASPVSIPLAEAYSALQTKIADGQENPLALIYTAKFFEVQKYCSLTNHAWDGFWLLASGKV 256

Query: 248 WDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQRQQ 302
           W  +P D++   AK  N   I++ ++  K  +  +  +   G V  T   E  QQ
Sbjct: 257 WKSVPDDLKQVMAKHFNAAAIKQRSDIVKANQTLQADLEAKGLVFNTTNAEVFQQ 311