Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

 Score =  328 bits (840), Expect = 1e-94
 Identities = 171/328 (52%), Positives = 232/328 (70%), Gaps = 3/328 (0%)

Query: 5   LTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKAC 64
           L L  A + A T F A        IVIKF+HV   +  PKG  A L +K   E + G+  
Sbjct: 2   LKLSRALLCAATLFAAGLAQAADPIVIKFAHVV-AENTPKGQGALLFKKLAQERLPGRVK 60

Query: 65  MQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQ 124
           ++V+PNS+L+ D K +EALL GDVQ+ APSL+KFE++T++ +I+DLPFLF D+ AVDRFQ
Sbjct: 61  VEVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTQQVQIYDLPFLFNDLAAVDRFQ 120

Query: 125 SSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVAQFE 184
           + A+G+ L  AM  + + GL +WHNG+KQ+S+NK +  P DA+GLKFRVQAS VL  QF+
Sbjct: 121 A-AQGKALLTAMQDKNILGLAYWHNGLKQLSSNKALHEPKDARGLKFRVQASSVLEEQFK 179

Query: 185 QIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTS 244
            I ANP+KMSFAE Y GLQT  ++G ENTWSN   QK  EVQ   TE+NHG++DY+V+T+
Sbjct: 180 AIRANPRKMSFAEVYQGLQTGTVNGTENTWSNYESQKVNEVQKYFTESNHGLIDYMVITN 239

Query: 245 SKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEA-GGVVRTLTPEQRQQW 303
           + +W+GLP D+R    +I+ EVT+E N ++  + +  KQ II+A    +  LTPEQRQ W
Sbjct: 240 ATFWNGLPPDIRSTLEQIMVEVTVEVNKQAEALNQSAKQKIIDAKTSEIIELTPEQRQLW 299

Query: 304 VDALKPVWQKFEKDIGADLIEAALAANQ 331
            +A++PVWQKFE +IGADLI+AA A+NQ
Sbjct: 300 REAMRPVWQKFEGEIGADLIKAADASNQ 327