Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., TRAP transporter substrate-binding protein from Variovorax sp. OAS795

 Score =  132 bits (332), Expect = 1e-35
 Identities = 91/313 (29%), Positives = 148/313 (47%), Gaps = 4/313 (1%)

Query: 3   KPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGK 62
           + L L AA++L +++  AA   D  E  IKF H+ N D HP  +      + V  +  GK
Sbjct: 9   RTLALAAAALLGLST--AAVAQDIQERTIKFGHLNNPD-HPTSLGVRKFAEIVAAKSGGK 65

Query: 63  ACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDR 122
             +Q F +S L ++ +   AL  G  ++   S +      K++ + D PFLF +    D 
Sbjct: 66  IKVQEFASSQLGNELQQQSALQGGVQEMLVASTTSLNGIVKEFGLLDFPFLFANAKQADA 125

Query: 123 FQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANK-PILVPADAKGLKFRVQASDVLVA 181
                 G+ L   +  +GV  L F+  G + ++ +K PI+  +D +GLK RV  + V + 
Sbjct: 126 LVDGPLGKMLAAKLPEKGVIVLGFFDLGFRNVTNSKRPIMKGSDLEGLKLRVIPNPVFLE 185

Query: 182 QFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLV 241
            F+   ANP  M FAE YG L++K +DG+EN ++ I   K++EVQ   + TNH      V
Sbjct: 186 TFKTFKANPVPMPFAELYGALESKAVDGEENPFAVIASSKFYEVQKYVSGTNHVYATNPV 245

Query: 242 VTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQRQ 301
             S ++WD L A  +        E    +   S  V       +   G +   + P +  
Sbjct: 246 QISKRFWDKLSATEQKILQDAATEAQNWQRVVSRDVSAKALGELTAKGMLYNDVPPAELA 305

Query: 302 QWVDALKPVWQKF 314
           +    ++PV+ KF
Sbjct: 306 KMRAEVQPVYAKF 318