Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., sialic acid TRAP transporter substrate-binding protein SiaP from Variovorax sp. OAS795

 Score =  114 bits (286), Expect = 3e-30
 Identities = 88/292 (30%), Positives = 134/292 (45%), Gaps = 20/292 (6%)

Query: 5   LTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDK--HPKGIAASLLEKRVNEEMNGK 62
           L  IAA  LA T+  A       +  +K++HV  T +  H   + A+   + + +  NGK
Sbjct: 8   LKAIAACALAATALGATGIAG-AQTKLKWAHVYETSEPFHKYSVWAA---EEIKKRTNGK 63

Query: 63  ACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAV-- 120
             +QVFP S+L  +  + + L  G V +     S      K   +   PF+F D + +  
Sbjct: 64  YDIQVFPASSLGKESDINQGLTLGTVDIVLTGASFAGNTYKPLAVTYFPFIFRDSEHLLK 123

Query: 121 ----DRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQAS 176
               D FQ  AKG + K+      +  L ++       SA KP+  P D KGLK RV  +
Sbjct: 124 YAKSDVFQELAKGYDDKSG---NHITALNYYGARHVTSSAAKPVAKPEDMKGLKIRVPDA 180

Query: 177 DVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGI 236
              +A  + +GAN   ++FAE Y  LQ   +D QEN    I  +K+FEVQ   + T H I
Sbjct: 181 PAYLAFPKALGANATPIAFAEVYLALQNNTVDAQENPLPTIEAKKFFEVQKNISLTGHII 240

Query: 237 LDYLVVTSSKWWDGLPADVRDQFAKILNEVTIERN-----AESNKVEELNKQ 283
              L V S + W  L AD +  F +++ E   +       +E+   EE  K+
Sbjct: 241 DSLLTVVSGQLWGKLSADEKKIFTEVMQEAAEKTGRDIIASEARLTEEFKKR 292