Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., C4-dicarboxylate TRAP substrate-binding protein DctP from Pseudomonas segetis P6

 Score =  361 bits (926), Expect = e-104
 Identities = 188/331 (56%), Positives = 243/331 (73%), Gaps = 4/331 (1%)

Query: 1   MFKPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMN 60
           MFK      A  L+++    A   DP  IVIKFSHV   D  PKG  A+L +K V E + 
Sbjct: 1   MFKMTAKALACALSLSIAGMAQAADP--IVIKFSHVV-ADNTPKGQGANLFKKLVEERLP 57

Query: 61  GKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAV 120
           GK  ++V+PNS+L+ D K +EALL GDVQL APSL+KFE++TKK +IFDLPFLF D+ AV
Sbjct: 58  GKVKVEVYPNSSLFGDGKEMEALLLGDVQLIAPSLAKFEQYTKKLQIFDLPFLFNDIHAV 117

Query: 121 DRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLV 180
           D+FQ S +G+EL  +M  + + GL +WHNGMKQ+SANKP+  P DA+GLKFRVQAS VL 
Sbjct: 118 DKFQQSPQGQELLTSMESKNITGLGYWHNGMKQLSANKPLHEPKDARGLKFRVQASAVLE 177

Query: 181 AQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYL 240
            QF+ + ANP+KMSFAE Y GLQT V++G EN +SNIY QK+ EVQ   TE+NHG+LDY+
Sbjct: 178 EQFKAVRANPRKMSFAEVYQGLQTGVVNGAENPYSNIYSQKFNEVQKYITESNHGVLDYM 237

Query: 241 VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEA-GGVVRTLTPEQ 299
           ++T++K+W+GLP DVR +  KIL EVT E N ++  + E +KQ II+A    + TLTPEQ
Sbjct: 238 LITNTKFWNGLPEDVRTELDKILVEVTAEVNKQAEILNEGDKQRIIDAKTSEIITLTPEQ 297

Query: 300 RQQWVDALKPVWQKFEKDIGADLIEAALAAN 330
           R +W DA+KPVW+KFE DIGADLI+AA A+N
Sbjct: 298 RAEWRDAMKPVWKKFEGDIGADLIKAAEASN 328