Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  139 bits (350), Expect = 1e-37
 Identities = 97/330 (29%), Positives = 165/330 (50%), Gaps = 21/330 (6%)

Query: 3   KPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVT-NTDKHPKGIAASLLEKRVNEEMNG 61
           + L +   ++ +V+S  A +        ++F + T  TD   + IAA    + + E+ NG
Sbjct: 8   RSLLIAGLTVFSVSSLAAQS--------LRFGYETPQTDS--QHIAAKKFNELLKEKTNG 57

Query: 62  KACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVD 121
           +  +++FP+STL +   ++  +  G + +     + F      + + D+PFLF D     
Sbjct: 58  ELTLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFTGLAPVFNLLDVPFLFRDTAHAH 117

Query: 122 RFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANK-PILVPADAKGLKFRVQASDVLV 180
           +      G+ELK ++  +G+K L +W NG + ++ ++ P+  P D KGLK R   S + +
Sbjct: 118 KTLDGKVGDELKKSLDSKGLKVLAYWENGWRDVTNSRAPVKTPGDLKGLKIRTNNSPMNI 177

Query: 181 AQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYL 240
           A F+  GANP  M F+E Y GL+T+ ID QE+  + ++  K++EVQ   + T+H     L
Sbjct: 178 AAFKIFGANPIPMPFSEVYTGLETRTIDAQEHPINVVWSAKFYEVQKYLSLTHHAYSPLL 237

Query: 241 VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEA--GGVVRTLTPE 298
           +V +   +D L      QF + L     E      K+   ++Q II+      V  LT  
Sbjct: 238 LVINKAKFDAL----SPQFQEALLSSAKEAGDYQRKLVAEDQQKIIDGMKEAEVEVLTDI 293

Query: 299 QRQQWVDAL-KPVWQKFEKD--IGADLIEA 325
            R+ + DAL   V   F KD   GADL++A
Sbjct: 294 DRKAFSDALGSQVRDMFLKDNPQGADLLKA 323