Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO from Escherichia coli ECOR38

 Score =  140 bits (352), Expect = 6e-38
 Identities = 101/328 (30%), Positives = 166/328 (50%), Gaps = 23/328 (7%)

Query: 7   LIAASILAVTSFNAAANCDPGEIVIKFSHVTN-TDKHPKGIAASLLEKRVNEEMNGKACM 65
           L  A + A ++ + AA        ++F + T+ TD   + IAA      + E   G+  +
Sbjct: 10  LFIAGLAAFSTSSMAAQS------LRFGYETSQTDS--QHIAAKKFNDLLQERTKGELKL 61

Query: 66  QVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQS 125
           ++FP+STL +   ++  +  G + +     + F   +    + D+PFLF D     +   
Sbjct: 62  KLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTLD 121

Query: 126 SAKGEELKNAMTRRGVKGLEFWHNGMKQISANK-PILVPADAKGLKFRVQASDVLVAQFE 184
              G++LK ++  +G+K L +W NG + ++ ++ P+  PAD KGLK R   S + +A F+
Sbjct: 122 GKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAFK 181

Query: 185 QIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTS 244
             GANP  M FAE Y GL+T+ ID QE+  + ++  K++EVQ   + T+H     LVV +
Sbjct: 182 VFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFYEVQKYLSLTHHAYSPLLVVIN 241

Query: 245 SKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYII----EAGGVVRTLTPEQR 300
              +DGL      +F + L     E      K+   ++Q II    EAG  V  +T   R
Sbjct: 242 KAKFDGL----TPEFQQALISSAQEAGNYQRKLVAEDQQKIIDGMKEAG--VEVITDLDR 295

Query: 301 QQWVDAL-KPVWQKFEKDI--GADLIEA 325
           + + DAL   V   F KD+  GADL++A
Sbjct: 296 KAFSDALGNQVRDMFVKDVPQGADLLKA 323