Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., 2,3-diketo-L-gulonate-binding periplasmic protein YiaO from Azospirillum sp. SherDot2

 Score =  148 bits (374), Expect = 2e-40
 Identities = 98/329 (29%), Positives = 159/329 (48%), Gaps = 3/329 (0%)

Query: 6   TLIAASILAVTSF-NAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKAC 64
           +L+A  +L    F  AAA  +  +  +KF+   N  +HP+G  A      V  +  GK  
Sbjct: 7   SLVAGLLLPGLLFAGAAAAAEYKDRSVKFAF-QNVKEHPQGQGAQKFADIVEAKSGGKIK 65

Query: 65  MQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQ 124
           +++FP  TL  D + + AL  G V+++  +        K++ + DLPFLF      D   
Sbjct: 66  VKLFPGGTLGGDVQTVSALQGGIVEMSVMNAGILVSQAKEFALVDLPFLFNSATEADALL 125

Query: 125 SSAKGEELKNAMTRRGVKGLEFWHNGMKQISANK-PILVPADAKGLKFRVQASDVLVAQF 183
               GE+L   +  +G+ GL FW  G + ++ N+ P+   AD  GLK RV  + + +  F
Sbjct: 126 DGPVGEQLMAKLPEKGLVGLGFWDLGFRNLTNNRRPVKTAADIAGLKIRVIQTPIYIDIF 185

Query: 184 EQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVT 243
           + +GANP  ++F E Y  L+T  +DGQEN    I   K+ EVQ   T T H      ++ 
Sbjct: 186 KALGANPVPLAFPELYSALETGTVDGQENPAKTIELTKFNEVQKYMTITRHIYNPQSLII 245

Query: 244 SSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQRQQW 303
           S K+WD L +D +  F     E T+ +   S + E      +   G  +  L  ++  + 
Sbjct: 246 SKKFWDTLNSDEKALFQSAAAEATVFQRKLSREQEADALASLKAKGMTIDELPADELGKI 305

Query: 304 VDALKPVWQKFEKDIGADLIEAALAANQK 332
            + +KPV  K++ +IG  L+  A A  +K
Sbjct: 306 REKVKPVVDKYKAEIGDALVTQAYATIEK 334