Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Extracytoplasmic solute receptor protein YiaO from Alteromonas macleodii MIT1002

 Score =  114 bits (285), Expect = 3e-30
 Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 8/321 (2%)

Query: 5   LTLIAASILAVTSFNAAANCDPGEI-VIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKA 63
           LTL A ++L  ++   + N   GE+ V++  H  +T +H    A   L +R++   +G  
Sbjct: 7   LTLSATALLLTSA--CSQNELQGEVTVLRLGHTLDT-QHSVHKAMEYLGERLDYYSDGTM 63

Query: 64  CMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRF 123
            + ++P+S L  + +++E L  G + +   S S  E F  + +IF +P++F D +   R 
Sbjct: 64  SVVIYPSSQLGTEREMVELLQIGSLAMTKVSASPLEGFAPEMKIFSIPYIFRDNEHFWRV 123

Query: 124 QSSAKGEELKNAMTRRGVKGLEFWHNGMKQISAN-KPILVPADAKGLKFRVQASDVLVAQ 182
            +S  G+EL + +    +KGL ++  G +    N KPI  P+D  GLK RV  S   VA 
Sbjct: 124 LNSDLGDELLSGVEDFRLKGLGYYDAGSRSFYTNDKPIETPSDLNGLKIRVLNSPTAVAT 183

Query: 183 FEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVV 242
              +G     +++ E Y  LQ  V+DG EN   + Y  +++E+    +   H  +  +++
Sbjct: 184 VRALGGAATPVAWGELYTALQQGVVDGAENNPPSYYLSRHYEIARYYSLDEHTSVPDVML 243

Query: 243 TSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQRQQ 302
            S   W+ L    +    K + E ++E   E  K         ++A GV   +TP+ +  
Sbjct: 244 ASLPVWESLNEQQQTWLTKAM-EDSVEYQRELWKTSTQASLEKVKAEGVT-VITPD-KAP 300

Query: 303 WVDALKPVWQKFEKDIGADLI 323
           +V+A+KP  + FE     DLI
Sbjct: 301 FVEAVKPFHKSFEDTPIGDLI 321