Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

 Score =  103 bits (257), Expect = 6e-27
 Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 5/322 (1%)

Query: 7   LIAASILAVTSFNAAANCDPGEIVIKFSHVTN--TDKHPKGIAASLLEKRVNEEMNGKAC 64
           L+  S L   +  A A   P +   +   V +   D  P+      + + V  ++ G+  
Sbjct: 9   LLKLSALGAATLAAPALMRPAQARTRRLTVASLFADDKPETKIWVKISELVEAKLPGRFH 68

Query: 65  MQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQ 124
             +  +  L  + +V E +  G VQ +  ++S    +  + +I DLPFLF D + V +  
Sbjct: 69  FNIVKSGALGGEKEVAENIRLGSVQASLSTVSSLSGWVPELQILDLPFLFRDSEHVRKVV 128

Query: 125 SSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVAQFE 184
           +   GEELK  +  +     +F + G + + A +P+  P   KG K RV  S +    + 
Sbjct: 129 TGETGEELKTKLAAQQFVAADFINYGARHLLAKEPVTRPEQLKGKKIRVIQSPLHTKLWS 188

Query: 185 QIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTS 244
             G  P  +   ETY  L T V D  + T S   G K +EV    TET H     +V   
Sbjct: 189 AFGMTPVGIPITETYNALATGVADAMDLTKSAYAGFKLYEVVPYLTETGHIWATGVVYYG 248

Query: 245 SKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQRQQWV 304
           + +W+ L  + +  F +  +E     N    + E  +    +  GG  + L PE   +W 
Sbjct: 249 AAFWNQLDDEEKKVFLEASSEGARYFNQLIVEDEVKSVDLALSKGG--KVLQPEMLDEWR 306

Query: 305 DALKPVWQKFEKDIGA-DLIEA 325
              + VWQ F   +G  + IEA
Sbjct: 307 KGAQGVWQDFAGIVGGLEKIEA 328