Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., C4-dicarboxylate binding protein from Agrobacterium fabrum C58

 Score =  142 bits (359), Expect = 9e-39
 Identities = 95/334 (28%), Positives = 162/334 (48%), Gaps = 8/334 (2%)

Query: 3   KPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGK 62
           + L L   +I       A A  +     I+ S+  N D HP G     ++  ++++  GK
Sbjct: 2   RKLLLTTTAIAFAVGAAAPAMAEFNSRNIRVSNGINQD-HPVGNGIKAMQACLDDKSGGK 60

Query: 63  ACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDR 122
             +  F    L  D +  +AL +G  +    S S          +FDLPFLF +    D 
Sbjct: 61  LKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGLIPSLGVFDLPFLFANDKEADA 120

Query: 123 FQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVP-ADAKGLKFRVQASDVLVA 181
               A G+ +   +  +G+  L +W NG + +S +K  +    D  GLK RV  +++ + 
Sbjct: 121 VMDGAFGDMMNKKLEEQGLVNLAYWENGFRNLSNSKHAVNKWEDFSGLKVRVMQNNIFLD 180

Query: 182 QFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLV 241
            F+ +GAN   M+F E +  L+T  ID QEN +  I   K++EVQ   TETNH    +L 
Sbjct: 181 TFQNLGANATPMAFGEVFSALETNAIDAQENPYVTIDTSKFYEVQKYVTETNHAYTPFLF 240

Query: 242 VTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYI--IEAGGV-VRTLTPE 298
           + S   +D    + +    +      + R+ E   + ELN++ +  I+A G+ V TL+PE
Sbjct: 241 LFSKPIFDSYTPEEQTALREC---AVVGRDEERKVIRELNQKSLEKIKAAGLEVNTLSPE 297

Query: 299 QRQQWVDALKPVWQKFEKDIGADLIEAALAANQK 332
           ++ +  +    V++K + +IGAD+++A LA  +K
Sbjct: 298 EQTRIREKSMVVYEKHKAEIGADVVDAVLADLKK 331