Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., Sialic acid TRAP transporter permease protein SiaT from Xanthobacter sp. DMC5

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 25/187 (13%)

Query: 15  QSWFSRVGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVL 74
           ++W  +       + E   A  + A  L+  A VI RY  +  ++W+ E    +F W+ L
Sbjct: 14  RAWAVKASAVLGWLTEIPAAVLVVAEILVLLAGVIFRYALHKPLIWSDELASMLFLWLSL 73

Query: 75  VGASFGVKRHFHIGVDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPFITER 134
            G+   + R  H+ +  ++ +   R R  + ++A+A  +AF +++L       HP I   
Sbjct: 74  FGSVIALNRGEHMRMTAIVGMMKPRARAFFDMIAIAAAVAFLLMIL-------HPAIEYA 126

Query: 135 AWYETDDIPMPDMLQFLADWVNEGERYEKLPRFIPYAALPIGMALLTFRFLQIAWQIITG 194
              E   + MP +               ++P     AA+P+G AL+    L    Q  TG
Sbjct: 127 --QEEAYVVMPAL---------------EIPNTWRAAAIPVGTALMLMVGLLKLAQHATG 169

Query: 195 KLDRMIA 201
           + D +IA
Sbjct: 170 R-DAVIA 175