Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 187 a.a., TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter from Variovorax sp. SCN45

 Score = 59.7 bits (143), Expect = 4e-14
 Identities = 33/94 (35%), Positives = 49/94 (52%)

Query: 30  EFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHFHIGV 89
           E LIA  +  M +L F NV++RY FN  I  + E + ++F WM  +GA   +K H H+GV
Sbjct: 13  EALIAAALAVMVVLVFGNVVLRYGFNSGITVSEEVSRWLFIWMTFLGAVVALKEHGHLGV 72

Query: 90  DVLINIAPARLRKLYALVAVACCLAFSILLLIGS 123
           D+++   P   +K+         L    LL  GS
Sbjct: 73  DMVVQKLPPVGKKICLATGHVVMLYIVWLLFQGS 106