Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 190 a.a., TRAP transporter small permease from Variovorax sp. OAS795

 Score = 75.1 bits (183), Expect = 9e-19
 Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 30/204 (14%)

Query: 21  VGQFTDSI---EEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGA 77
           +G+F D++    EFLIA  +  M +L F NV++RY FN  I  + E + ++F W   +GA
Sbjct: 1   MGKFVDTVCKGIEFLIALGLAIMVVLVFGNVVLRYGFNSGITVSEELSRWLFIWGTFLGA 60

Query: 78  SFGVKRHFHIGVDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPFITERAWY 137
              ++ H H+G+D+++   P   +K+  ++  A  +   +LL++GSW      +      
Sbjct: 61  LVALREHAHLGIDMVVGRLPVIGKKICLIIGHALMIFIVVLLVMGSWEQVKINL------ 114

Query: 138 ETDDIPMPDMLQFLADWVNEGERYEKLPRFIPYAALPIGMALLTFRFLQIAWQIITGKL- 196
              D+  P     ++     G         + +  L  G+ LL        W++ITG+L 
Sbjct: 115 ---DVTAPTTGWSMSIVYLSG---------LVFGVLACGLLLLDL------WKVITGQLS 156

Query: 197 -DRMIAGHEAEEDLEALKAELSEA 219
            D ++   E+EE ++ LK  L +A
Sbjct: 157 DDELVMVQESEEAVQ-LKQVLDDA 179