Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 181 a.a., TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 63.2 bits (152), Expect = 3e-15
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 26/179 (14%)

Query: 31  FLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHFHIGVD 90
           +L+  F+  M ++ F NV+MRY FN  I  + E + ++F WM  +GA   +    H+G D
Sbjct: 15  WLMVLFLACMVVMVFGNVLMRYGFNSGITLSEELSRWLFVWMTFLGAVVALNERAHLGTD 74

Query: 91  VLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPFITERAWYETDDIPMPDMLQF 150
            LI+  P   RKL    ++   L    L+  G+W        +  W  T  +    M  F
Sbjct: 75  SLISRLPVLGRKLCLAASLGLMLYVCWLIYQGAWEQ-----VKINWDSTSAVMETSMAYF 129

Query: 151 LADWVNEGERYEKLPRFIPYAALPIGMALLTFRFLQIAWQIITGKL--DRMIAGHEAEE 207
            A               + +A L   + LL        W+++ G++  D +I   E+E+
Sbjct: 130 YASG-------------MVFAVLAAPILLLNL------WRLLAGQMSEDELIGIRESED 169