Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 182 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 68.6 bits (166), Expect = 8e-17
 Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 37/198 (18%)

Query: 19  SRVGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGAS 78
           +R G     +E FL AF + AM ++ F NV++RY F+  I+ + E + F F W+V VGA 
Sbjct: 6   TRSGPVVRVLEAFL-AFCLIAMVVMVFGNVVLRYGFDSGIVMSEELSRFAFIWLVFVGAV 64

Query: 79  FGVKRHFHIGVDVLINIAPARLRKLYALVAVACCLAFSILLLIGS-----WNYWHPFITE 133
             +    H+GVD ++   P              CL  S LL++G      W  W      
Sbjct: 65  VAMHEGLHLGVDSMVKALPRG--------GKVACLVISELLILGCCAMFFWGTWRQ---- 112

Query: 134 RAWYETDDIPMPDMLQFLADWVNEGERYEKLPRFIPYAALPIGMALLTFRFLQIAWQIIT 193
              +E +   +  +      WV  G  Y        + +L IG+       L   W++ T
Sbjct: 113 ---HEVNQTTIAQVTGMSMIWV-FGMGY--------FTSLGIGLV-----SLHKLWRLAT 155

Query: 194 GKL--DRMIAGHEAEEDL 209
           G+L  D +I  HE+EE++
Sbjct: 156 GRLRDDELITVHESEEEV 173