Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 52.8 bits (125), Expect = 4e-12
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 26  DSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHF 85
           D +   +I   M AMTL+    V  RY  + +I  A E +   F W++ +    G+K   
Sbjct: 33  DKVSMVVIVVAMAAMTLMVTLQVFWRYALSSSIDSADEVSRLFFVWVIFLAIPHGIKYAV 92

Query: 86  HIGVDVLI-NIAPARLRKLYALVAVACCLAFSIL 118
           H+G+D+L+ +++P    +L+ LV+VA  +  + +
Sbjct: 93  HVGIDLLVMSLSPRNKDRLFRLVSVASAVLMAAI 126