Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 193 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 62.0 bits (149), Expect = 8e-15
 Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 32/196 (16%)

Query: 30  EFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHFHIGV 89
           E LIA  + AM +L F NV++RY FN  I  + E   + F W   +GA   ++   H+GV
Sbjct: 13  ENLIALLLAAMVVLVFGNVVLRYGFNSGITVSEELARWFFIWGTFLGAVVAMRDRSHLGV 72

Query: 90  DVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPFITERA--WYETDDIPMPDM 147
           D+L++  PAR ++L       C +A  +++L+  W  +   + +    W    ++  P  
Sbjct: 73  DMLVSRLPARGKRL-------CLVASHLVMLLIVWMLFSGSLQQSRINW----EVSAPTS 121

Query: 148 LQFLADWVNEGERYEKLPRFIPYAALPIGMALLTFRFLQIAWQIITGKL--DRMIAGHEA 205
              +A     G           +A L   M LL        W+I++G++  D ++   E+
Sbjct: 122 GYSMAWVYGVG---------CVFACLAAPMLLLDL------WRILSGRISDDELVMIQES 166

Query: 206 EE--DLEALKAELSEA 219
           EE  +LE + AE + A
Sbjct: 167 EETANLEQILAEHTAA 182