Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., TRAP transporter small permease from Magnetospirillum magneticum AMB-1

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 68/198 (34%), Positives = 95/198 (47%), Gaps = 35/198 (17%)

Query: 26  DSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNIL----------WALEGTVFMFAWMVLV 75
           D +EE+LIAF MG  TL+ F  V+ RY     +L          WA E  + MF WM   
Sbjct: 5   DHLEEWLIAFLMGTATLIIFVAVLQRYAAGTALLYPLVGHLDFSWAQELCIIMFVWMAKF 64

Query: 76  GASFGVKRHFHIGVDVLIN-IAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPFITER 134
           GA++GV+   H+GVDV+IN + P    KL     +A  L   I+  +G     H  +   
Sbjct: 65  GAAYGVRTGIHVGVDVVINRLDPQWRAKLIVFGLLAGALFTGIVATMGG----HFVMENG 120

Query: 135 AWYETDDIPMPDMLQFL-ADWVNEGERYE-------KLPRFIPYAALPIGMALLTFRFLQ 186
           A Y            FL A  +  G+ YE       + P ++ Y+A+P+G AL+ FRFLQ
Sbjct: 121 AHY-----------AFLHAFGLPTGDLYEGPITPDMEAPTWVVYSAIPLGSALMCFRFLQ 169

Query: 187 IAWQII-TGKLDRMIAGH 203
           +    I TG+L     GH
Sbjct: 170 VCVGFIRTGELPHHDHGH 187