Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 157 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 30/111 (27%), Positives = 59/111 (53%), Gaps = 7/111 (6%)

Query: 28  IEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHFHI 87
           I E ++A  +  ++ + F N+I+RY F  +IL   E + ++F W+  +GA      + H+
Sbjct: 4   ILEAILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYLFVWLTFIGAIVAFMDNAHV 63

Query: 88  GVDVLI-NIAPARLRKL----YALVAVAC-CLAF-SILLLIGSWNYWHPFI 131
            V  L+  ++PA  R++    ++L+   C  LA+ + L  I  W+ + P +
Sbjct: 64  QVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLKTIQDWSDYSPIL 114