Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

 Score =  199 bits (506), Expect = 1e-55
 Identities = 131/443 (29%), Positives = 223/443 (50%), Gaps = 28/443 (6%)

Query: 5   LLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFI 64
           +L + +I ++  GV IA+ LGL  +L ++  +   +  V  T   + +  +TL A+P FI
Sbjct: 12  VLLVFLIAILASGVWIALGLGLVGLLAMVLTTPVPIGQVLATTVWSASASWTLAALPLFI 71

Query: 65  LASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVI 124
                +    +++ + R     + W  G L   +V+ C +FAA+SGSS AT   IG I +
Sbjct: 72  WMGEILFRTRLSEEMFRGLAPWLQWLPGRLLHVNVIGCGIFAAVSGSSAATCATIGKIAL 131

Query: 125 AGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLL--- 181
             + K GY K  + G +  +GTLG+LIPPSI MVVY+   NVSV ++FL G +PGLL   
Sbjct: 132 PELDKRGYDKGMSLGSLAGSGTLGLLIPPSIPMVVYAVTANVSVLQVFLAGFLPGLLVMG 191

Query: 182 --AGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPT 239
             +G +++ ++    R    P+ P + + E L+ + +    LLL+  +   +  GI T T
Sbjct: 192 LYSGYIMLWSLLNPGRTP--PRDPHMPFAEKLRQSAKLVPCLLLIAAVFLSLVLGIATAT 249

Query: 240 EAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIML 299
           E AA     +  +A +     G    KT  + V+                  A +L+ M+
Sbjct: 250 ECAAWGVTGALALAWW----SGTLTWKTLIESVM-----------------SATRLSCMI 288

Query: 300 MFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVI 359
           M IIA A      +    IP  + E +    L P    + + ++ ++ G  ++   ++V+
Sbjct: 289 MLIIAGAAFTTAAMAYTGIPVALAEWVQGLNLTPGKLALALTVMYIILGCLVDGISMIVL 348

Query: 360 VAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALP 419
            A +V P+    G D +  G+ +V+++E+  ITPPVG NLFV   ++     +V KAA P
Sbjct: 349 TAVIVLPMVKQAGFDLVWFGVYLVIHVEMAQITPPVGFNLFVLQNMSGRDTFSVAKAAFP 408

Query: 420 WVGVMFLFLIIVTYVPWVSTWLP 442
           +  ++ + +II+T  P ++  LP
Sbjct: 409 FFILLNIAVIIITTFPEIALVLP 431