Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Sialic acid TRAP transporter large permease protein SiaM from Xanthobacter sp. DMC5

 Score =  270 bits (691), Expect = 6e-77
 Identities = 155/472 (32%), Positives = 248/472 (52%), Gaps = 63/472 (13%)

Query: 13  MMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFILASTFMST 72
           +M+ GVP+AI++  +S++++L         +AQ +  A    + LLA+PFFILA   M+ 
Sbjct: 11  LMLCGVPVAIAMAGASLVYILVSGTVPDVVIAQRMI-AGVESFPLLAVPFFILAGNLMNI 69

Query: 73  GGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGMVKNGY 132
            GV  RI  FA+A+VGW RGGL   +++  ++F+ +SG++ A    +G+I I  M  +GY
Sbjct: 70  AGVTGRIYAFAVALVGWMRGGLGQVNIIGSVIFSGMSGTAIADAAGLGTIEIKAMKDHGY 129

Query: 133 SKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGLMLIIAIYI 192
           S EFA GV   + TLG +IPPS+  V+Y    NVS+G +FLGGVVPG++  L+++  +  
Sbjct: 130 STEFAVGVTAASATLGPIIPPSLPFVIYGMLANVSIGALFLGGVVPGVVMTLLMMGTVAY 189

Query: 193 TARIKNLPKQPFVGWKEALKAAKE------------------------------------ 216
            A            W++ L A+ E                                    
Sbjct: 190 FAHRNGWGSDAAFNWRQLLSASIEVVIVLAFPAAVYVMIEVGLSTNQAVLIALAVLIALD 249

Query: 217 ------ASWGLLLVVIILGGIYGGIFTPTEAAAVAAVYSFFIANFIYRDMGPFADKTNTK 270
                 A   L+  VI++GG+  G FTPTEAA  A ++S F+    YR M        T 
Sbjct: 250 WYFDFSAVMALMTPVILIGGMTLGWFTPTEAAVAAVIWSLFLGLVRYRSM--------TL 301

Query: 271 PVLVKVVETFVHKDTKATLYDAGKLTIMLMFIIANALILKHVLTEERIPQMITESMLSAG 330
             L K              +D  + T  ++FI+  A I   +LT  +  QM+++++L   
Sbjct: 302 KTLAKAT------------FDTIETTASVLFIVTAASIFAWLLTASQAAQMLSDAILGFT 349

Query: 331 LGPITFLIVVNLILLVGGQFMEPSGLLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGM 390
                FL + NL++L  G F++    + I+ P++ PI + LGIDPIH G++M +N+ IG+
Sbjct: 350 QNKWVFLALANLLILFVGCFIDTIAAITILVPILLPIVLKLGIDPIHFGLIMTLNLMIGL 409

Query: 391 ITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGVMFLFLIIVTYVPWVSTWLP 442
           + PP+G+ LFV + VA++S+     A LPW+  + + L+ +TY+P ++ WLP
Sbjct: 410 LHPPLGMVLFVLARVARLSVERTTMAILPWLVPLMIALLAITYIPGLTLWLP 461