Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

 Score =  291 bits (746), Expect = 2e-83
 Identities = 163/444 (36%), Positives = 258/444 (58%), Gaps = 24/444 (5%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60
           MA+ +LF +   +++VG P+A  LGL+S+  +L+  D     V Q L N+    +++LAI
Sbjct: 1   MAITILFGVFSLLLLVGTPVAFCLGLASLATVLY-LDLPPVVVFQQL-NSGMNAFSMLAI 58

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           PFFI A   M  GG+A R+I  A ++VG  RGGL   +VVA  +F  +SGS+ A   AIG
Sbjct: 59  PFFIFAGDLMMRGGIADRLIGMAASLVGHLRGGLGQVNVVASTLFGGISGSAVADASAIG 118

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYS--AATNVSVGRMFLGGVVP 178
            I+I  M ++GY+K++A  V  N+  + ++IPPS  M++YS  A   +S+  +F  G++P
Sbjct: 119 GIMIPQMARHGYAKDYAVNVTVNSAIIALMIPPSHNMIIYSLSAGGTISIADLFTAGIMP 178

Query: 179 GLLAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTP 238
           GLL    ++I  Y+ AR +  P   F GW   L++   A  G++L+ II GG+  GIFT 
Sbjct: 179 GLLLAAAMMITAYVVARNRGYPAGTFPGWHAVLRSVVAAIPGIMLIGIIFGGVRSGIFTA 238

Query: 239 TEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIM 298
           TE++ +A +Y+  +   +YR+M  +AD              FV    +ATL  A + T M
Sbjct: 239 TESSCIAVIYALLVTTLVYREMH-WAD--------------FV----EATL-GAVRTTAM 278

Query: 299 LMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLV 358
           ++ +I  A     ++   ++P+   E M +    P   L+++N+ILL+ G FM+ + +++
Sbjct: 279 VLLVIGTAASFGWLMAFLQVPKATIEMMQAISSNPYVILLLINIILLILGTFMDMAPMII 338

Query: 359 IVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAAL 418
           I  P+  P+  A GIDP+H G+++++N  IG+ TPPVG  LFV   V K+++   +K   
Sbjct: 339 ICTPIFLPLVKAFGIDPVHFGVILILNAGIGLNTPPVGSVLFVGCAVGKITIGEAMKTIW 398

Query: 419 PWVGVMFLFLIIVTYVPWVSTWLP 442
           P+ G     L+IVTYVP VS WLP
Sbjct: 399 PFFGASIAVLMIVTYVPAVSLWLP 422