Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., TRAP transporter large permease from Variovorax sp. OAS795

 Score =  320 bits (820), Expect = 6e-92
 Identities = 172/430 (40%), Positives = 264/430 (61%), Gaps = 22/430 (5%)

Query: 16  VGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFILASTFMSTGGV 75
           + V +A+S+GL+SIL +   +   L SV + +FN+    + L AIPFFILA   M TGG+
Sbjct: 15  LSVSVAVSIGLASILGIQVANVNMLISVKE-MFNSI-NKFPLAAIPFFILAGNLMETGGI 72

Query: 76  AKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGMVKNGYSKE 135
           ++R++ FA ++VG  +GGL +  V+ CM+FAA+SGSS AT  AIG+I+I  ++K+GY   
Sbjct: 73  SRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAILIPALIKHGYPTA 132

Query: 136 FAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGLMLIIAIYITAR 195
           +AA +   +  LG++IPPSI M++Y  +  VS+G +F+ G  PG+L  L L++ +++  +
Sbjct: 133 YAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGILISLALMLFVWVYCK 192

Query: 196 IKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAAAVAAVYSFFIANF 255
            +   K    G     KAA +A W LL+ VIILGGIYGGIFTPTEA+AVA  Y+  +   
Sbjct: 193 WRGWGKNDGEGRMPFGKAAWQAGWALLMPVIILGGIYGGIFTPTEASAVAVFYALVVGVV 252

Query: 256 IYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFIIANALILKHVLTE 315
           IYR++ P                    KD    L  +   + ++MFIIANA +   ++T 
Sbjct: 253 IYREIKP--------------------KDLYLILRKSVLSSAVIMFIIANAGLFAFLITR 292

Query: 316 ERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAPLVFPIAIALGIDP 375
             +P  I   +      P  FL+ VN  L + G F+E S  ++++AP++ P+A+  GIDP
Sbjct: 293 AGVPDAIGHWLQEVLKSPAMFLLGVNAALFIIGMFIETSAAIIVLAPILAPVAVHFGIDP 352

Query: 376 IHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGVMFLFLIIVTYVP 435
           +H G++MVVN+ +GMITPP G+NLF    VA++S+  +V   +P+V V+   L+++TYVP
Sbjct: 353 VHFGLIMVVNLALGMITPPFGVNLFAACTVARISLDRIVTYLVPFVLVILACLMVITYVP 412

Query: 436 WVSTWLPTLL 445
           W+S  L  L+
Sbjct: 413 WISLALRDLV 422