Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., TRAP transporter large permease from Variovorax sp. OAS795

 Score =  259 bits (661), Expect = 2e-73
 Identities = 148/450 (32%), Positives = 252/450 (56%), Gaps = 27/450 (6%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60
           M + +L ++ + ++++GVP+A S+GL+S+  +L+ +   +A V Q +       ++ LAI
Sbjct: 1   MELTVLSLVFLVLLVLGVPVAFSIGLASVATVLY-AGLPVAVVFQKMVGGMQ-IFSFLAI 58

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           PFF+ A   M  GG+A+RI+RFA ++VG  RGGL +++V+ C +F  ++GS  A V A+G
Sbjct: 59  PFFVFAGELMLYGGIAQRIVRFANSLVGHVRGGLGMSNVIGCTLFGGVAGSPVADVSAMG 118

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAAT----NVSVGRMFLGGV 176
           S++I  M K GY  ++A  V  +A  +G L+P S  +++++ AT    +VSV  + L G+
Sbjct: 119 SVMIPLMKKEGYDADYAVNVTTHAALVGALMPTSHNLIIFTLATTGIASVSVLSLILAGL 178

Query: 177 VPGLLAGLMLIIAIYITARIKNLP-KQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGI 235
           +P L+  L  + A Y  A  +  P +  F GW E L A   A  GL++V IIL GI  G+
Sbjct: 179 IPALILTLCNLGAAYYVAIRRGYPIRGAFPGWGEVLAAFIGALPGLMIVAIILVGILSGV 238

Query: 236 FTPTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKL 295
           FT TE+AA A +++  +  F+YR +                      KD       A K 
Sbjct: 239 FTATESAATAVLWALGVTVFVYRSLS--------------------RKDFFKACAKACKT 278

Query: 296 TIMLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSG 355
           T +++ +I  +    + +    +PQ   E M S    P    +++N++L V G F++ + 
Sbjct: 279 TGVVLLLIGISSAFGYFMALYEVPQKTGELMTSVSSDPWVIFLMINVLLFVLGTFLDMAA 338

Query: 356 LLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVK 415
            ++I  P+  PIA+  G+ P+  GI+M++N  +G+ TPPVG   F+   +  +S+  V++
Sbjct: 339 TILICTPIFLPIAMQFGMSPVQFGIVMLINCALGLNTPPVGTTQFIGCAIGGVSVGQVMR 398

Query: 416 AALPWVGVMFLFLIIVTYVPWVSTWLPTLL 445
           +  P+ G + + L++VTYVP  S WLP L+
Sbjct: 399 SIWPFYGALLICLMLVTYVPAFSMWLPDLV 428