Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Pseudomonas sp. RS175

 Score =  308 bits (788), Expect = 3e-88
 Identities = 161/436 (36%), Positives = 266/436 (61%), Gaps = 24/436 (5%)

Query: 13  MMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFILASTFMST 72
           ++++G+P+A +LG ++++   W      A + Q         ++LLAIPFF+LA   M+ 
Sbjct: 13  LILIGMPVAYALGAAALIGAWWIDIPFQAMMIQVAGGV--NKFSLLAIPFFVLAGAIMAE 70

Query: 73  GGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGMVKNGY 132
           GG+++R++ FA  +VG+ RGGL++ ++VA   F A+SGSS A   ++GS++I  M + GY
Sbjct: 71  GGMSRRLVAFASVLVGFVRGGLSLVNLVASSFFGAISGSSVADTASVGSVLIPEMTRRGY 130

Query: 133 SKEFAAGVICNAGTLGILIPPSIVMVVYSAATN--VSVGRMFLGGVVPGLLAGLMLIIAI 190
            +++A  V  +     +L PPS   V+YS A    VS+G +F+ G+VPG+L  L L+   
Sbjct: 131 PRDYATAVTVSGSVQALLTPPSHNAVLYSLAAGGTVSIGSLFMAGIVPGILMNLCLMALC 190

Query: 191 YITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAAAVAAVYSF 250
            + A+ +N PK   +  K+ALK  KEA WG++ + IILGGI  G+FT TE+AA+A V++F
Sbjct: 191 LVFAKKRNYPKGEVIPLKQALKICKEAMWGMMTLFIILGGILSGVFTATESAAIAVVWAF 250

Query: 251 FIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFIIANALILK 310
           F+   IYRD      K +  P L+       H+  +           ++M +I  A    
Sbjct: 251 FVTMCIYRDY-----KWSELPKLM-------HRTVRTIS--------IVMILIGFAASFG 290

Query: 311 HVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAPLVFPIAIA 370
           +++T   IP  IT + L+        L+ +N++LL+ G  M+ + L++I+ P++ P+ + 
Sbjct: 291 YIMTLMEIPAKITTAFLTLSDNRYVILMCINVMLLLLGTVMDMAPLILILTPILMPVIVG 350

Query: 371 LGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGVMFLFLII 430
           +G+DP+  G++M+VN+ IG+ITPPVG  LFV S + K+S+ + VKA LP+ G++FL L+ 
Sbjct: 351 IGVDPVQFGMIMLVNLGIGLITPPVGAVLFVGSAIGKVSIESTVKALLPFYGMLFLVLLA 410

Query: 431 VTYVPWVSTWLPTLLM 446
           VTY+P +S WLP L++
Sbjct: 411 VTYIPAISLWLPKLVL 426