Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  289 bits (740), Expect = 1e-82
 Identities = 157/436 (36%), Positives = 266/436 (61%), Gaps = 22/436 (5%)

Query: 10  VIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFILASTF 69
           ++ + ++GVP+  ++   S+++L +     + +VA+ L N     + LLAIP FILA+T 
Sbjct: 14  ILALSLLGVPVGQAMIGGSVIYL-YMKGMDMGTVAEQLLNGTYSSFLLLAIPLFILAATI 72

Query: 70  MSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGMVK 129
           M +G V  R+++F  A+VG F GGLA  +V+  ++FA++SGS+ A     G ++   M K
Sbjct: 73  MGSGSVLDRLMKFCNALVGHFPGGLAQVNVLQSVVFASMSGSALADAAGSGKLMQVMMTK 132

Query: 130 -NGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGLMLII 188
            N Y+  FAA +   +  LG ++PPSI +V+Y+  +  S+G +F+ GV+PGLL G + + 
Sbjct: 133 DNRYTAGFAAALTAASSVLGPILPPSIPLVLYALVSGTSIGYLFIAGVLPGLLLGAVQMG 192

Query: 189 AIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAAAVAAVY 248
            ++  A+ +N P +P V  +E  +  +EA   L+L V++LG +Y GI TPTEAA +AA Y
Sbjct: 193 LVHYLAKKRNFPVEPRVPLRELPRITREAFPALMLPVVLLGCLYTGITTPTEAAGLAAAY 252

Query: 249 SFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFIIANALI 308
           +  I+  +YR +G                     KD    L  + +++I +  +IA AL+
Sbjct: 253 ALLISVLLYRSIG--------------------WKDLYDALLSSARISISIGMLIAGALV 292

Query: 309 LKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAPLVFPIA 368
             +V+T E IP  ++  + +  L P+ FL++VNLILLV G F+E S +++++ P++ P A
Sbjct: 293 FNYVITVENIPASLSGILSTFDLSPLGFLLLVNLILLVLGCFLEGSTIILVILPVLLPTA 352

Query: 369 IALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGVMFLFL 428
           +ALG+DP+H G++ V+N+ IG++TPP GL LF+ + +A +S+M +V+  +P++ VM   L
Sbjct: 353 VALGVDPVHFGVVAVLNIMIGLVTPPYGLLLFMMTKIADISLMELVREMVPFLVVMIGAL 412

Query: 429 IIVTYVPWVSTWLPTL 444
            IVT  P +  +LP +
Sbjct: 413 AIVTLWPDMVLFLPRM 428