Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  278 bits (710), Expect = 3e-79
 Identities = 153/427 (35%), Positives = 252/427 (59%), Gaps = 23/427 (5%)

Query: 14  MIVGVPIAISLGLSSILFLLWHSDASLASV-AQTLFNAFAGHYTLLAIPFFILASTFMST 72
           M +G+PIA +L L+S + L+WH D   A + AQ L    A  + LLA+PFF+LA   M+ 
Sbjct: 14  MALGMPIAYAL-LASGVALMWHLDLFDAQILAQNLIGG-ADSFPLLAVPFFMLAGEIMNV 71

Query: 73  GGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGMVKNGY 132
           GG+++RI+  A+ +VG  RGGL   +++A  + +ALSGS+ A   A+ ++++  M K G+
Sbjct: 72  GGLSRRIVNLALTVVGHVRGGLGYVTIMAGCLLSALSGSAVADAAALTALLLPMMTKAGH 131

Query: 133 SKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGLMLIIAIYI 192
            +  A G+I   G +G +IPPSI +V++  A NVS+ ++F+  +VPGLL G  L +    
Sbjct: 132 DRARAGGLIAATGVIGPVIPPSIGLVIFGVAANVSISKLFMAAIVPGLLIGGALWVTWAW 191

Query: 193 TARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAAAVAAVYSFFI 252
             R + +   P    KE LKAA++A W L+L +IIL G+  GIFTPTEAA VAAVY+ F+
Sbjct: 192 LVRRETIQPPPRKSGKEILKAARDAVWALVLPIIILVGLRMGIFTPTEAAVVAAVYALFV 251

Query: 253 ANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFIIANALILKHV 312
           A  +YR++              ++ E FV          A K + ++MF+IA A++   +
Sbjct: 252 ATVVYRELS-----------FKQLHEVFV---------VAAKTSAIVMFLIAAAMVSAWL 291

Query: 313 LTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAPLVFPIAIALG 372
           +T   +P  + + +      PI  +  + L+++V G  M+ +  ++I+ P++ P+  A G
Sbjct: 292 ITVADLPSKVVDMLQPFMGNPILLMAAIMLLVMVVGTAMDMTPTILILTPVLMPVVKAAG 351

Query: 373 IDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGVMFLFLIIVT 432
           IDP++ G+M ++N  IG++TPPVG  L V +GV +M M  V++  +P++   F  + ++ 
Sbjct: 352 IDPVYFGVMFIINNSIGLVTPPVGTVLNVVAGVGRMKMDEVMRGVMPFMVAEFAVMFLMV 411

Query: 433 YVPWVST 439
             PW+ T
Sbjct: 412 LCPWLVT 418