Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  266 bits (679), Expect = 1e-75
 Identities = 154/443 (34%), Positives = 257/443 (58%), Gaps = 23/443 (5%)

Query: 5   LLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFI 64
           +L ++ + +M++G PIA ++ ++ ++ +      S   V Q LF+     + L+AIPFFI
Sbjct: 4   VLGLVFLALMVIGAPIAFAMLIAGLVAVWLKPGLSSLVVMQNLFSGLDS-FPLMAIPFFI 62

Query: 65  LASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVI 124
           LA+  M+ G +   +++FA  +VG  RGGL  A+++    F+ +SGS+ A     G+++I
Sbjct: 63  LAAELMTGGALTDVLLKFAARLVGMRRGGLGHANILTLTFFSGISGSALADAAGPGAMLI 122

Query: 125 AGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATN-VSVGRMFLGGVVPGLLAG 183
             M K GY   +AA +  +   +G +IPPSI+M+VY+   N VS+  +FL GVVPG L  
Sbjct: 123 KMMRKAGYKDSYAAALTASTAIVGPIIPPSIIMIVYAMTDNSVSITGLFLAGVVPGFLIA 182

Query: 184 LMLIIAIYITARIKNLPKQP-FVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAA 242
           L L++  +I +  +     P  +     L+    A   L+L VIILGGI+ GIFTPTEA+
Sbjct: 183 LSLMVVNHIVSVRRGYRSSPELLDPAPLLRLFWRALPALMLPVIILGGIHLGIFTPTEAS 242

Query: 243 AVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFI 302
           A A +Y+  +  F+Y  +     + +  P               A L+ +  +T  ++FI
Sbjct: 243 AAAVLYALLVGRFVYGTL-----RMDMLP---------------AILFRSALMTASILFI 282

Query: 303 IANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAP 362
           +A + +   VLT  +IPQ +   +    L PI  LI +N++LL+ G F+EP   ++I+ P
Sbjct: 283 VATSAVFAWVLTVGQIPQTMAAWIAGMALSPIELLIAINVLLLLVGIFIEPLPGVMIMVP 342

Query: 363 LVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVG 422
           ++ P+A A G++ +H  I+++VN+ +GM+TPPVG  LFVTS V+ + M  +V+  +P + 
Sbjct: 343 ILGPLAEAAGLNSLHFAIVVIVNLTLGMVTPPVGGLLFVTSAVSGVRMGPMVREMVPMLV 402

Query: 423 VMFLFLIIVTYVPWVSTWLPTLL 445
            +F  L+++T+VP  STWLP +L
Sbjct: 403 ALFTVLMLLTFVPAFSTWLPGVL 425