Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  264 bits (675), Expect = 4e-75
 Identities = 145/435 (33%), Positives = 243/435 (55%), Gaps = 21/435 (4%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60
           MAV +    ++G + +G+PIA SL L     + +     +  +AQTL N  A  ++LLAI
Sbjct: 1   MAVVIFLCCLLGGIAIGLPIAWSLLLCGAALMAYLDMFDVQIMAQTLVNG-ADSFSLLAI 59

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           PFF+LA   M+ GG++KRI+   + +VG   GGL    V+A M+ A+LSGS+ A   A+ 
Sbjct: 60  PFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVIAAMIMASLSGSAVADTAAVA 119

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGL 180
           ++++  M    Y    + G+I + G +  +IPPSI  +++  ++ +S+ ++F+ G+ PG+
Sbjct: 120 ALLVPMMRSANYPINRSVGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGI 179

Query: 181 LAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTE 240
           + G  L++  +  A   NLP QP    +E  ++     W L L VII+GG   G+FTPTE
Sbjct: 180 MMGAALMLTWWWQAGRLNLPSQPKATPREIWQSLVSGIWALFLPVIIIGGFRSGLFTPTE 239

Query: 241 AAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLM 300
           A AVAA Y+ F+A  IYR++                  +  H      L +A K T ++M
Sbjct: 240 AGAVAAFYALFVAVVIYREL---------------TFSSLYH-----VLVNAAKTTSVVM 279

Query: 301 FIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIV 360
           F++A A +   ++T   +P M+++ +      P    IV+ + ++V G  M+ +  ++I+
Sbjct: 280 FLVAAAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMISIMVVGMVMDLTPTVLIL 339

Query: 361 APLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPW 420
            P++ P+     IDPI+ G+M ++N  IG+ITPPVG  L V SGVAK+   + V+   P+
Sbjct: 340 TPVLLPLVKEANIDPIYFGVMFIINCSIGLITPPVGNVLNVISGVAKLKFDDAVRGVFPY 399

Query: 421 VGVMFLFLIIVTYVP 435
           V V+   L++  ++P
Sbjct: 400 VVVLMSLLVLFIFIP 414