Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., C4-dicarboxylate ABC transporter from Escherichia coli ECOR38

 Score =  247 bits (630), Expect = 6e-70
 Identities = 140/443 (31%), Positives = 240/443 (54%), Gaps = 23/443 (5%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60
           M+  L+  L+I  + + + + +++ +  I + L+ S   +    Q L  A     +LLAI
Sbjct: 1   MSWLLIIPLMIVCLFLNIRVYLAMFIGIIAYFLFFSSVPIEIAVQRLI-APTQSPSLLAI 59

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           PFFIL  T MS  G+A+RI+  A  +VG  RGGL +A+++   M   +S S+ A    + 
Sbjct: 60  PFFILLGTLMSYTGIAERILHIANVLVGKMRGGLGVANILVSTMMGGVSASNLADAAMLS 119

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGL 180
            +++  M + GY++ FAA +      +  +IPP I +++Y    +VS+G+MF+ G+VPGL
Sbjct: 120 RMMVPEMERKGYNRAFAAAITAGGSLVTPIIPPGIALIIYGLVADVSIGKMFIAGLVPGL 179

Query: 181 LAGLMLIIAIYITARIKNL--PKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTP 238
           L  ++L+  +Y+ AR  N    ++ +   KE + +  +A   L L+  ++GGI   IFTP
Sbjct: 180 LCAVVLMFTVYLVARKTNAKPSRESWPTGKEVVFSLGQAWPALFLIFAVVGGIRANIFTP 239

Query: 239 TEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIM 298
           TEA AVA +    I  FIYR+M            +  VV+          L +  + T  
Sbjct: 240 TEAGAVAVLIVLAIGFFIYREMR-----------ISHVVK---------ALGETARATAS 279

Query: 299 LMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLV 358
           +M +I  +  L  + + E     +   + S       FL+++N++LL  G F+E + +L+
Sbjct: 280 VMLVIMASAALGWIFSMEHAGVAVANFVTSLTENKYMFLLIINILLLTLGMFLEGNAILL 339

Query: 359 IVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAAL 418
           I+ PL+ P+    GIDP+H GI+M+ N+ IG  TPPVG  + +   + ++S+ N  K +L
Sbjct: 340 ILVPLLKPVVEHFGIDPVHFGIIMIFNLSIGAFTPPVGTVMLLVCNITQVSVGNFFKQSL 399

Query: 419 PWVGVMFLFLIIVTYVPWVSTWL 441
           P +  + L L++VTY+P +S +L
Sbjct: 400 PLLAALLLMLMLVTYIPAISLFL 422