Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., TRAP transporter, DctM subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  290 bits (742), Expect = 6e-83
 Identities = 171/447 (38%), Positives = 259/447 (57%), Gaps = 25/447 (5%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDA--SLASVAQTLFNAFAGHYTLL 58
           + + +L +  I +M +GVP+A SLG SS+L L+    A  S+ ++AQ +  A    ++LL
Sbjct: 4   ITIIILVLSFITLMGLGVPVAWSLGFSSLLTLMVTVAAVPSMTTIAQRM-GAGLNSFSLL 62

Query: 59  AIPFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVA 118
           AIPFFILA   M+ GG+A R+I  A A+ G   GGL   +V+A M+F A++GS+ A   A
Sbjct: 63  AIPFFILAGEIMNKGGIANRLINLAKALTGKLPGGLLYVNVIAAMLFGAIAGSAVAAASA 122

Query: 119 IGSIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATN-VSVGRMFLGGVV 177
           +G I+   M   GY KE    V   + T G++IPPS V++VYS A+  VS+  +F+ G +
Sbjct: 123 LGGILGKRMEDEGYPKELGVAVNVTSSTTGLVIPPSNVLIVYSLASGGVSIAALFVAGYI 182

Query: 178 PGLLAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFT 237
           PGL  GL+L++      + K LP      +KE  K    A+  L L+VI++GGI  G+FT
Sbjct: 183 PGLFMGLLLMLTAAYFIKKKKLPAGEPTSFKELGKVFFSAAPSLTLLVIVIGGIVMGVFT 242

Query: 238 PTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTI 297
            TEA+A+A +Y   ++ F Y ++ P                    +D  A L  +   T 
Sbjct: 243 ATEASAIAVLYCLGLS-FFYGELKP--------------------RDLPAILLKSSATTA 281

Query: 298 MLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLL 357
           ++  +IA ++ +  V++ E IPQ I+  +LS        LI++NLILL  G FM+ +  +
Sbjct: 282 VVAMLIATSMAMSWVMSSEDIPQSISAVLLSLSDNKFVILIIINLILLFVGIFMDMTPAV 341

Query: 358 VIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAA 417
           +I  P+  P+   LGIDP+H GI+MV+N+ IG+ TPPVG  LF+  GVAK S+ NVVK  
Sbjct: 342 LIFTPIFLPVVTELGIDPVHFGIIMVLNLCIGLCTPPVGSVLFIGVGVAKTSISNVVKPL 401

Query: 418 LPWVGVMFLFLIIVTYVPWVSTWLPTL 444
           LP+   M + L ++T  P ++ WLP+L
Sbjct: 402 LPFFIAMIIGLAVITIWPQLTLWLPSL 428