Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., 2,3-diketo-L-gulonate TRAP transporter large permease protein from Escherichia coli BL21

 Score =  272 bits (696), Expect = 1e-77
 Identities = 148/435 (34%), Positives = 245/435 (56%), Gaps = 21/435 (4%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60
           MAV +    ++G + +G+PIA +L L     + W     +  +AQTL N  A  ++LLAI
Sbjct: 1   MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMAQTLVNG-ADSFSLLAI 59

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           PFF+LA   M+ GG++KRI+   + +VG   GGL    V+A M+ A+LSGS+ A   A+ 
Sbjct: 60  PFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVA 119

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGL 180
           ++++  M    Y    AAG+I + G +  +IPPSI  +++  ++ +S+ ++F+ G+ PG+
Sbjct: 120 ALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGM 179

Query: 181 LAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTE 240
           + G  L++  +  A   NLP+Q     +E   +     W L L VII+GG   G+FTPTE
Sbjct: 180 MMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIWALFLPVIIIGGFRSGLFTPTE 239

Query: 241 AAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLM 300
           A AVAA Y+ F+A  IYR+M                  T  H      L  A K T ++M
Sbjct: 240 AGAVAAFYALFVATVIYREM---------------TFATLWH-----VLIGAAKTTSVVM 279

Query: 301 FIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIV 360
           F++A+A +   ++T   +P M+++ +      P    IV+ + +L+ G  M+ +  ++I+
Sbjct: 280 FLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTPTVLIL 339

Query: 361 APLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPW 420
            P++ P+    GIDPI+ G+M ++N  IG+ITPP+G  L V SGVAK+   + V+   P+
Sbjct: 340 TPVLMPLVKEAGIDPIYFGVMFIINCSIGLITPPIGNVLNVISGVAKLKFDDAVRGVFPY 399

Query: 421 VGVMFLFLIIVTYVP 435
           V V++  L++  ++P
Sbjct: 400 VLVLYSLLVVFVFIP 414