Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Azospirillum sp. SherDot2

 Score =  217 bits (553), Expect = 5e-61
 Identities = 137/448 (30%), Positives = 238/448 (53%), Gaps = 34/448 (7%)

Query: 7   FILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFN-AFA--GHYTLLAIPFF 63
           F  ++GM+ + V I +++ ++     L  +D   A++  TL N AFA   +Y L  IP F
Sbjct: 11  FAGLMGMLALRVHIGVAMFIAGGAIYLTINDGQTAALLFTLNNLAFARLSNYDLSVIPLF 70

Query: 64  ILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIV 123
           +L   F + GG++K + R A A++G +RGGLA+AS  AC  F A+ GSS AT   +G + 
Sbjct: 71  LLMGQFATHGGLSKALFRAAGALIGHWRGGLAMASTAACAAFGAICGSSLATAATMGQVA 130

Query: 124 IAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLA- 182
           +  +   GYS   A G +  +GTLGILIPPS+ +VVY+  T  S+G++F+  VVPG++A 
Sbjct: 131 LPELQARGYSGRLATGTLAASGTLGILIPPSVPLVVYAVLTQESIGKLFVAAVVPGVIAA 190

Query: 183 -GLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEA 241
            G + +IA+ +       P    + W E L+A       LL+ ++++ GIY G   PTEA
Sbjct: 191 LGYLAVIALIVRRNPAAGPASAPLPWSERLRAQLGVLPVLLVFLVVIVGIYDGWANPTEA 250

Query: 242 AAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMF 301
           A++ A     IA         FA      P LV            A+++   + T M+  
Sbjct: 251 ASIGAAACGLIA---------FASGGMRWPQLV------------ASIHGTAQATAMIFV 289

Query: 302 IIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVA 361
           ++  A +L   L   ++P  +   +  +G+ P+  L  +  I ++ G  M+   ++++  
Sbjct: 290 VLIGADLLNSALAVSQMPVELAAWVRDSGMPPLLVLFSIIGIYILLGCVMDSLAMILLTI 349

Query: 362 PLVFPIAIAL---GID----PIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAK-MSMMNV 413
           P+ +P+ + L   G+D     +  GI+ ++ +EIG++ PPVG+NL+V + +A+ + M   
Sbjct: 350 PIFYPVVMGLDFFGMDATDKSVWFGILALMVVEIGLVHPPVGMNLYVINRLARGVPMRET 409

Query: 414 VKAALPWVGVMFLFLIIVTYVPWVSTWL 441
               +P++    L ++++ +VP +  WL
Sbjct: 410 AWGVMPFLASDLLRILLIVFVPGICLWL 437