Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Azospirillum sp. SherDot2

 Score =  211 bits (536), Expect = 5e-59
 Identities = 128/451 (28%), Positives = 227/451 (50%), Gaps = 30/451 (6%)

Query: 4   ALLFILVIGMMIVGVPIAISLGLSSILFLLW--HSDASLASVAQTLFNAFAGHYTLLAIP 61
           A + ++V   +++G  + ++L L+ + F+     +   +  V  T     +  +TL A+P
Sbjct: 6   ASIVVVVTMFLMLGAGVWVALALAGVGFVAMALFTARPVGMVMATNIWGASTSWTLTALP 65

Query: 62  FFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGS 121
            FI     +    ++  + +      GW  G L   +++ C +FAA+SGSS AT   IG 
Sbjct: 66  LFIWMGEILFRTRISSDMFKGLAPWTGWLPGRLMHVNIIGCSIFAAVSGSSAATAATIGR 125

Query: 122 IVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGL- 180
           + I  + + GY      G +  AGTLG+LIPPSI+M+VY  A +VS+ R+F+ GV+PG+ 
Sbjct: 126 MTIPELNRRGYDPMMTLGSLAGAGTLGLLIPPSIIMIVYGVAADVSIARLFIAGVIPGIV 185

Query: 181 LAGLMLII----AIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIF 236
           L GL ++     ++    R+   P +P   + E ++        +LL+  +LG IY GI 
Sbjct: 186 LTGLFMLYVGGWSLLNPDRVP--PPEPSQSFGEKIRDTGALIPVMLLIAAVLGSIYVGIA 243

Query: 237 TPTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLT 296
           TPTEAA +  + S                      VL  V  T      + +L+ A   +
Sbjct: 244 TPTEAAGIGVLGSL---------------------VLALVTGTLNWTTFRDSLFGAAHTS 282

Query: 297 IMLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGL 356
            M+ FI+A A  L   +    IP+++ E + +  L P   L+ +    +V G F++   +
Sbjct: 283 CMIGFILAGAAFLTVAMGYTGIPRLLAEWITTMQLSPAALLVALTAFFVVMGCFLDGISM 342

Query: 357 LVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKA 416
           +V+   ++ P+    GID +  GI +++ +E+  ITPPVG NLFV   +    +  + KA
Sbjct: 343 VVLTTSVILPMVQRAGIDLLWFGIYIIIVVEMAQITPPVGFNLFVLQSMTGKDIFTIGKA 402

Query: 417 ALPWVGVMFLFLIIVTYVPWVSTWLPTLLMG 447
           +LP+  +M + + ++   P + +WLP++++G
Sbjct: 403 SLPFFLLMVVMVALLWVFPGMVSWLPSMMIG 433