Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., Neu5Ac permease from Alteromonas macleodii MIT1002

 Score =  308 bits (790), Expect = 2e-88
 Identities = 162/445 (36%), Positives = 271/445 (60%), Gaps = 26/445 (5%)

Query: 5   LLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAG---HYTLLAIP 61
           +L +    ++++ VPI+IS+G++++L ++   D + A++  T+    AG    + LLAIP
Sbjct: 7   ILVVTFFVLLLLNVPISISIGVATLLAMVMSMDIAPATI--TIAQRMAGGLNSFALLAIP 64

Query: 62  FFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGS 121
           FF+L+   M  GG+AKR+I  A+A++G   GGLA+ +VV+CM+F A+SGS+ AT  AIGS
Sbjct: 65  FFVLSGLIMGRGGIAKRLIECAMALIGALPGGLALVNVVSCMLFGAISGSAVATTSAIGS 124

Query: 122 IVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATN-VSVGRMFLGGVVPGL 180
            ++  M K GY   F+A V   A T G+LIPPS +++VY+ A+  VS+  +F+ G +PG+
Sbjct: 125 FMLPEMKKAGYEPNFSAAVTAAASTTGMLIPPSNILIVYAIASGGVSIAALFMAGYIPGI 184

Query: 181 LAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTE 240
           + GL L++  +I A++K  P  P +  K  ++    A   L L+ +++GGI GG+FT TE
Sbjct: 185 MVGLALMLVCFIYAKMKGYPLSPRLPIKVVVEKTIAALPSLFLIFLVIGGIVGGVFTATE 244

Query: 241 AAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLM 300
           A A+A VYS  +A   Y+++    D      + +K  ET                T ++M
Sbjct: 245 AGAIAVVYSLLLAVVFYKEV----DAKALPDIFLKAAET----------------TAIVM 284

Query: 301 FIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIV 360
            +IA +  +  +L+ E IPQ ++ ++LS    P+  L+++NL+L+V G F++ +  ++I 
Sbjct: 285 LLIAASTAMSWLLSFENIPQTLSNALLSISDNPLLILLLINLLLIVVGAFLDMTPAVLIF 344

Query: 361 APLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPW 420
            P+  P+A+ LG+  +  GIM+V+N+ IG+ +PPVG  LF+T  +AK  + N+++  +P 
Sbjct: 345 TPIFLPVALELGMSELQFGIMLVLNLSIGLCSPPVGAVLFITCAIAKTKLENIIRPLIPL 404

Query: 421 VGVMFLFLIIVTYVPWVSTWLPTLL 445
              MF+ L++VTYV W S  LP  L
Sbjct: 405 YVAMFVVLMLVTYVAWFSEALPRAL 429