Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  287 bits (735), Expect = 4e-82
 Identities = 156/446 (34%), Positives = 253/446 (56%), Gaps = 24/446 (5%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60
           MA  +LF +   +M++G PIA  LG++S   +L+     +    Q   N+    + ++AI
Sbjct: 1   MAYTILFGVFTLLMLIGTPIAFCLGIASFATVLYLGLPPIVVFQQ--MNSGMNVFAMMAI 58

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           PFFI A   M  GG+A R+IRFA  +VG  RGGL   ++VA  +F  +SGS+ A   A+G
Sbjct: 59  PFFIFAGDLMVRGGIAHRLIRFAAGLVGHLRGGLGQVNIVASTLFGGISGSAVADASAVG 118

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAAT--NVSVGRMFLGGVVP 178
            ++I  M K GY K++A  V  NA  + ++IPPS  M++YS A   NVSV  +F  G++P
Sbjct: 119 GLMIPQMAKRGYDKDYAVNVTVNAAIIALMIPPSHNMILYSIAAGGNVSVADLFTAGIIP 178

Query: 179 GLLAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTP 238
           GLL    L++  YI AR K  P +PF G+ + +     +  G+LL+ II GG+  GIFT 
Sbjct: 179 GLLLAAALMVTAYIVARRKGYPSEPFPGFSKLMYYLLASFPGILLIGIIFGGVRSGIFTA 238

Query: 239 TEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIM 298
           TE++ +A +Y+F +A  +YR++                 + FV       +  A + T M
Sbjct: 239 TESSCIAVLYAFLVAMLVYRELN---------------WDGFVE-----AVMGAVRTTAM 278

Query: 299 LMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLV 358
           ++ +I  A     ++   ++  ++  ++ +    PI  L+V+N+ILL+ G FM+ + +++
Sbjct: 279 VLLVIGTAASFGWLMAFLQVQTLMIAAISAISDNPIIVLLVINVILLLLGTFMDMAPMVI 338

Query: 359 IVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAAL 418
           I  P++ P+  A GIDP+H G++M++N  IG+ TPPVG  LFV   V  +++   ++   
Sbjct: 339 ISTPVLLPVVKAFGIDPVHFGVVMILNAGIGLNTPPVGTVLFVGCAVGGITIREAMRTIW 398

Query: 419 PWVGVMFLFLIIVTYVPWVSTWLPTL 444
           P+ G     L+ VTY+P +S WLP+L
Sbjct: 399 PFFGASIAVLLAVTYIPSLSLWLPSL 424