Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  278 bits (710), Expect = 3e-79
 Identities = 162/446 (36%), Positives = 251/446 (56%), Gaps = 31/446 (6%)

Query: 6   LFILV---IGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPF 62
           LF+ V   +G M +GVP+A SL    ++ + +    + A +AQ + +  A  +TLLAIPF
Sbjct: 3   LFVFVGSLLGAMAIGVPVAFSLMFCGVVLMWYMGMFNTAIIAQNMISG-ADTFTLLAIPF 61

Query: 63  FILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSI 122
           FILA   M++GG+++RII FAIA+VG  RGGL I ++VA ++ A++SGS+ A   A+ +I
Sbjct: 62  FILAGELMNSGGLSRRIIDFAIALVGHIRGGLGIVAIVAAIIMASISGSAAADTAALAAI 121

Query: 123 VIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLA 182
           +I  M K GY+   + G+I   G +  +IPPS+  +V+  A NVS+ ++FL G+VPG+L 
Sbjct: 122 LIPMMAKAGYNIPRSGGLIAAGGIIAPVIPPSMAFIVFGVAANVSITQLFLAGIVPGILM 181

Query: 183 GLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAA 242
           G+ LIIA  I  R  N+   P    KE L A   A W L + VIILGGI  GI TPTEAA
Sbjct: 182 GISLIIAWLIVVRKDNIKPLPKTSGKERLVATVRAGWALGMPVIILGGIKAGIMTPTEAA 241

Query: 243 AVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFI 302
            VAA Y+ F+   IYR++ P                     D    L  A K T ++MF+
Sbjct: 242 VVAAGYALFVGMVIYRELKP--------------------ADLFHVLLRAAKSTSIIMFL 281

Query: 303 IANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAP 362
           +  AL+   ++T   IP  +   +      P+  ++ + +++ + G  ++ +  ++I+ P
Sbjct: 282 VCAALVSAWLITAANIPNEVAGYIEPLIDRPMLLMVAMMVLVFIVGTALDLTPTILILTP 341

Query: 363 LVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVG 422
           ++ PI    GIDP++ G++ ++N  IG+ITPPVG+ L V SGV ++ +  V     P   
Sbjct: 342 VLMPIVKQAGIDPVYFGVLFIINNAIGLITPPVGVVLNVVSGVGRIPLGKVTIGVWP--- 398

Query: 423 VMFLFLIIVTYVPWVSTWLPTLLMGP 448
               FL+  T V  +    P ++M P
Sbjct: 399 ----FLVAETIVLALLVIFPDIVMVP 420