Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  291 bits (745), Expect = 2e-83
 Identities = 157/374 (41%), Positives = 225/374 (60%), Gaps = 5/374 (1%)

Query: 1   MCDVFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLS 60
           M  + +IDDE  IR  L +  E  +         E+ L  +       V++ DI +PG+ 
Sbjct: 1   MPKILIIDDERAIRSTLKEILEFENYTVDEAEDGEKGLQLLGKSKYD-VVLCDIKMPGMD 59

Query: 61  GQNLLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEK 120
           G  +L   +    + P I+I+ HG I  AV+A   GAYDF++KP    RL+ TV  A++K
Sbjct: 60  GIEVLEKAMEVTPDSPFIMISAHGTIDTAVEATKKGAYDFLQKPPDLNRLLVTVRNALDK 119

Query: 121 RRLTLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKEL 180
             L  E + LK+  K+S+T    ++G + A+  ++  I +VA T A +L+ G  G+GKEL
Sbjct: 120 SHLVTETKILKK--KISKTY--EMVGNSPALSRVKQAIEKVAPTDARVLITGPNGSGKEL 175

Query: 181 VARSLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTL 240
           VAR++HE S+R     V +NC A+P  LIESEL+GHEKG+FT A  +R+GKFE A GGTL
Sbjct: 176 VARAIHENSNRSNGPLVEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFEQANGGTL 235

Query: 241 FLDEIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQD 300
           FLDE+  M + AQ ++LR LQE  I R+G ++ I +D+RV+AAT  +L +      FR+D
Sbjct: 236 FLDEVGDMSLSAQAKVLRALQEHKITRVGGDKDIQVDVRVVAATNKNLLEEIEAKNFRED 295

Query: 301 LYYRLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGN 360
           LY+RL ++ + +PPL +RREDIP L   FL   A  YG     +T   ++ L   DW GN
Sbjct: 296 LYHRLGVILIHVPPLNDRREDIPDLVQKFLNDIANDYGNKPKTITPEALEYLKELDWRGN 355

Query: 361 VRELRNAAERYVLL 374
           VRELRN  ER V++
Sbjct: 356 VRELRNVVERLVIM 369