Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., sigma-54-dependent Fis family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  426 bits (1094), Expect = e-123
 Identities = 224/442 (50%), Positives = 294/442 (66%), Gaps = 5/442 (1%)

Query: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63
           +  +DDE  +RIA+ Q   LA  +    A  E AL  + ++  P ++VSD+ +PGL G  
Sbjct: 6   ILFVDDEEPMRIAVKQWLGLAGFDVTVLARPEGALGRL-SRDFPGILVSDVRMPGLDGIG 64

Query: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123
           LL +   QD +LPVIL+TGHGDI +AV+AM +GAYDFIEKPFAPERL   V RA EKRRL
Sbjct: 65  LLKAAQAQDPDLPVILVTGHGDIPLAVEAMREGAYDFIEKPFAPERLAQAVGRACEKRRL 124

Query: 124 TLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVAR 183
            LENR+L R+L     +  R+IG + A++ +R  + ++A    ++++FG+TG GKELVAR
Sbjct: 125 VLENRRL-RALGAGDDMARRLIGPSQAMENVRAQVRELAPLPLNVVIFGDTGCGKELVAR 183

Query: 184 SLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLD 243
            LH+   R  + FVA+NC A+PE + ESE +GHE GAFTGA  RR GK EHA GGTLFLD
Sbjct: 184 CLHDCGPRAARPFVAVNCAAIPETMFESEFFGHEAGAFTGAAQRRAGKVEHAHGGTLFLD 243

Query: 244 EIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYY 303
           E+ESMP+  Q +LLRVLQER IE +G N  IP+D+RVI A K DL      G+FR+DLYY
Sbjct: 244 EVESMPLALQAKLLRVLQERCIEPLGGNRTIPVDLRVITAAKADLLAEVRAGRFREDLYY 303

Query: 304 RLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRE 363
           RL++  + +PPL ERREDI ALF  F  +AA  +G+    LT  +VQ+LL+HDWPGNVRE
Sbjct: 304 RLHVAEIRLPPLAERREDIVALFESFAALAANAHGRTPPTLTEGNVQALLAHDWPGNVRE 363

Query: 364 LRNAAERYVL-LGKLAQFAESHEPKSKLLGLNEQVAEFEKSLLEQTLIECGGSIKATMER 422
           LRN AER+ L LG  A    + E +    GL   VA FE+  +E   I+  G +   M  
Sbjct: 364 LRNEAERFALGLGLRAAAPVAAEAQGD--GLQASVALFERQRIEAAFIQAQGDVAEVMRL 421

Query: 423 LHLPRKTLYDKMQKYQLDKESY 444
           L LPR+TL +KM KY +D+  +
Sbjct: 422 LDLPRRTLNEKMAKYGIDRRRF 443