Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  292 bits (748), Expect = 1e-83
 Identities = 160/397 (40%), Positives = 253/397 (63%), Gaps = 18/397 (4%)

Query: 58  GLSGQNLLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRA 117
           G  G + L  +   D +  VILIT  GD+ MAV+A+ +GA DFI KP+  E+L+ T+  A
Sbjct: 67  GKEGFHWLKQIKEIDPKAVVILITAFGDVEMAVQALKEGATDFILKPWQNEKLLATLSAA 126

Query: 118 IEKRR-------LTLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILL 170
              +        ++ ++RQL+  +K   +    IIG++++++ +   I +VA T A++L+
Sbjct: 127 SRLKESYDQVDNISQKSRQLQADMKKPFS---EIIGQSSSMKNIFSIIDKVAQTDANVLI 183

Query: 171 FGETGTGKELVARSLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVG 230
            GE GTGKEL+AR++H++S RR++ FV ++ GA+ E L ESEL+GH++GAFT A   R G
Sbjct: 184 LGENGTGKELIARAIHDRSLRRDEIFVGVDMGAITETLFESELFGHKRGAFTDAKEDRAG 243

Query: 231 KFEHAQGGTLFLDEIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQ 290
           +FE A  GTLFLDEI ++ M  Q +LL VLQ+R + RIG+N+ IP+DIR+I AT + +  
Sbjct: 244 RFEVADKGTLFLDEIGNLSMPLQSKLLTVLQKREVTRIGTNKSIPVDIRLICATNMKVHD 303

Query: 291 AAAEGKFRQDLYYRLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQ 350
              E  FRQDL YR+N V + +PPLRER++DIP L +HFL V A +Y K  +    + +Q
Sbjct: 304 MVMENTFRQDLLYRVNTVEIFLPPLRERQDDIPLLANHFLKVYAKKYRKDFSGFKPAAIQ 363

Query: 351 SLLSHDWPGNVRELRNAAERYVLLGKLAQ------FAESHEPKSKLLGLNE--QVAEFEK 402
            L ++ WPGN+REL++A ER +++ +  +      F  S +P ++ +  N    + E EK
Sbjct: 364 LLQNYSWPGNIRELQHAIERAIIMAEGQELDSRDFFFLSSKPSAEKVKTNGTLNLDEVEK 423

Query: 403 SLLEQTLIECGGSIKATMERLHLPRKTLYDKMQKYQL 439
           +++++ + + GG+I    + L L R +LY +++KY L
Sbjct: 424 NVIQKAIDKNGGNISKAAKELGLTRASLYRRLEKYGL 460