Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  309 bits (791), Expect = 1e-88
 Identities = 167/375 (44%), Positives = 233/375 (62%), Gaps = 5/375 (1%)

Query: 1   MCDVFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLS 60
           M  + +IDDE  IR  L +  E  D          E L  I++Q   LV+  DI +P + 
Sbjct: 1   MPKILIIDDEKVIRSTLKEILEYEDYEIHEAQDGVEGLKKIESQDFDLVLC-DIKMPKMD 59

Query: 61  GQNLLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEK 120
           G  +L  V   D +   I+I+ HG I  AV+A   GA+DFI KP    RL+ TV  A+EK
Sbjct: 60  GLEVLDKVYQSDKQPQFIMISAHGSIESAVEATKKGAFDFIPKPPDLNRLLLTVRNALEK 119

Query: 121 RRLTLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKEL 180
           + L  E + LK+  K+S+ L   ++GE+AAI  +++TI +VA T A +L+ G  GTGKEL
Sbjct: 120 KDLVTETKVLKK--KLSKKLD--MVGESAAILQVKETIEKVAPTDARVLITGPNGTGKEL 175

Query: 181 VARSLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTL 240
           VA  LH++S R +  F+A+NC A+P  LIESEL+GHEKGAFT A+ +R GKFE A GGT+
Sbjct: 176 VAHWLHQKSGRNKSPFIAVNCAAIPAELIESELFGHEKGAFTSANKQRQGKFEQANGGTI 235

Query: 241 FLDEIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQD 300
           FLDEI  M + AQ ++LR LQE  I R+G ++ I +D+RV+AAT  DLK+   E  FR+D
Sbjct: 236 FLDEIGDMSLSAQAKVLRALQEHKISRVGGDKDIKIDVRVLAATNKDLKKEIEENNFRED 295

Query: 301 LYYRLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGN 360
           LY+RL+++ + +P L++R+EDIP L   FL   A  YG     +    +  L  + W GN
Sbjct: 296 LYHRLSVILIQVPALKDRKEDIPLLVDRFLEDIAKEYGTTKKDIDDKAIAKLQEYPWTGN 355

Query: 361 VRELRNAAERYVLLG 375
           +RELRN  ER ++LG
Sbjct: 356 IRELRNVVERLIILG 370