Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., sigma-54 dependent transcriptional regulator from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  407 bits (1047), Expect = e-118
 Identities = 223/442 (50%), Positives = 295/442 (66%), Gaps = 7/442 (1%)

Query: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63
           V LI+D++D R AL +   L   + + F   E AL AI A   P V+++D+ +PGL G+ 
Sbjct: 9   VALIEDDADFRHALVERLTLEGYDVRPFPGAEPALRAIDAD-FPGVVITDLRMPGLDGRQ 67

Query: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123
           LLS +   D+ LP+I+ITGHGDI+ AV AM DGAYDF+ KPF  ERL D+++RA+EKR L
Sbjct: 68  LLSRLQALDAALPIIMITGHGDITDAVAAMKDGAYDFVAKPFPFERLQDSMNRALEKRGL 127

Query: 124 TLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVAR 183
            LENR+L      S    P + G + AI  LR TIAQ+AD + D+L+ GETGTGKE VAR
Sbjct: 128 VLENRRLLAMASDSGQELP-LAGSSRAITALRATIAQIADARMDVLIEGETGTGKEAVAR 186

Query: 184 SLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLD 243
           +LH    RR   FVA+NCGA+P+ LIESEL+GHE GAF GA  RRVG  E A  G+LFLD
Sbjct: 187 ALHNGGRRRLAPFVAVNCGALPDGLIESELFGHELGAFAGALRRRVGHVERAHNGSLFLD 246

Query: 244 EIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYY 303
           E+ESMP+  Q+++LRVL+ER +  IG+NE   LD+RV+A++KIDL +AA  G FR+DLYY
Sbjct: 247 EVESMPLAVQVKILRVLEEREVHPIGANEPRALDLRVLASSKIDLGEAARGGAFREDLYY 306

Query: 304 RLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRE 363
           RLN+V L +PPLRERREDIP LF HFL  AA R+G    +++ S  + L+  DWPGN+RE
Sbjct: 307 RLNVVRLRVPPLRERREDIPLLFAHFLRRAADRHGVDTPSISDSVRRLLVEADWPGNIRE 366

Query: 364 LRNAAERYVLLGKLAQFAESHEPKSKLLGLNEQVAEFEKSLLEQTLIECGGSIKATMERL 423
           L + AER  L        ++  P  + L L ++V  FE  LL   L    G I A +  +
Sbjct: 367 LAHFAERVAL-----SLDDTTRPPDEGLSLPDRVNRFEAELLRDALQSHCGDISAVLAEM 421

Query: 424 HLPRKTLYDKMQKYQLDKESYK 445
            +PRKTLYDK+Q++ L    ++
Sbjct: 422 QVPRKTLYDKLQRHGLKPADFR 443